Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.8e-173 612.5 302 100.0
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 2.2e-118 429.5 284 75.4
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 5.3e-109 398.3 300 67.7
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 3.5e-108 395.6 228 81.1
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 5.9e-108 394.8 231 79.7
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 5.9e-108 394.8 248 79.4
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.0e-107 394.0 236 78.4
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 1.7e-107 393.3 243 77.4
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.9e-107 392.5 229 79.9
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 2.9e-107 392.5 231 80.5
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 8.5e-107 391.0 250 74.0
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 1.5e-106 390.2 227 80.2
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 4.2e-106 388.7 236 76.3
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 7.2e-106 387.9 230 79.1
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 7.2e-106 387.9 244 75.0
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 1.2e-105 387.1 281 70.5
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 2.1e-105 386.3 240 75.4
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 6.1e-105 384.8 294 69.7
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 8.0e-105 384.4 281 70.5
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.0e-104 384.0 260 71.2
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.4e-104 383.6 290 67.6
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.8e-104 383.3 225 80.0
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 1.8e-104 383.3 262 72.1
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 2.3e-104 382.9 228 78.1
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 3.0e-104 382.5 229 78.2
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 5.2e-104 381.7 280 70.0
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 8.8e-104 380.9 263 70.7
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 1.1e-103 380.6 282 69.5
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 2.6e-103 379.4 264 71.2
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 7.4e-103 377.9 236 76.7
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 7.4e-103 377.9 228 77.2
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 7.4e-103 377.9 264 70.1
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 7.4e-103 377.9 226 79.2
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 9.7e-103 377.5 256 72.3
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.3e-102 377.1 267 70.0
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 1.3e-102 377.1 297 64.0
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 1.3e-102 377.1 257 72.0
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.7e-102 376.7 226 78.3
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 1.7e-102 376.7 283 67.1
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.7e-102 376.7 287 70.0
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 2.8e-102 375.9 267 70.0
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.8e-102 375.9 267 70.4
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.8e-102 375.9 242 74.0
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 4.8e-102 375.2 237 75.1
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 4.8e-102 375.2 235 76.2
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 4.8e-102 375.2 263 71.5
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 6.3e-102 374.8 236 75.8
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 6.3e-102 374.8 237 75.9
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 8.2e-102 374.4 240 73.8
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 8.2e-102 374.4 253 70.8
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 1.1e-101 374.0 234 75.6
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.1e-101 374.0 242 73.6
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 1.4e-101 373.6 242 74.4
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 1.8e-101 373.2 252 71.8
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 3.1e-101 372.5 290 63.8
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 4.1e-101 372.1 243 73.7
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 5.3e-101 371.7 283 66.8
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 9.1e-101 370.9 271 68.3
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 1.6e-100 370.2 235 75.3
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.6e-100 370.2 246 72.8
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.0e-100 369.8 267 69.3
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 4.5e-100 368.6 229 75.1
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 4.5e-100 368.6 248 72.6
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 7.7e-100 367.9 271 67.2
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.0e-99 367.5 238 73.9
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.3e-99 367.1 225 75.1
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 2.9e-99 365.9 241 73.4
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 2.9e-99 365.9 262 67.9
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 3.8e-99 365.5 271 66.8
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 8.5e-99 364.4 252 70.6
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 3.2e-98 362.5 244 70.9
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.2e-98 362.1 277 64.6
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 5.5e-98 361.7 225 75.6
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 6.1e-97 358.2 277 63.9
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 1.0e-96 357.5 276 65.6
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.3e-96 356.3 225 73.3
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.0e-96 355.5 289 62.6
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 6.8e-96 354.8 253 69.2
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 8.8e-96 354.4 253 70.4
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 2.0e-95 353.2 226 74.8
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 7.5e-95 351.3 263 68.4
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 7.5e-95 351.3 225 72.4
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 2.2e-94 349.7 241 69.3
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 2.2e-94 349.7 241 69.3
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 2.2e-94 349.7 241 69.3
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 8.3e-94 347.8 223 76.2
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 1.4e-93 347.1 229 72.1
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 1.6e-92 343.6 271 62.4
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 2.0e-92 343.2 230 72.2
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 3.5e-92 342.4 225 69.8
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 2.2e-91 339.7 225 69.8
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 7.2e-90 334.7 235 69.8
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.1e-89 333.2 252 65.5
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 6.1e-89 331.6 294 57.8
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 2.3e-88 329.7 273 63.0
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 2.0e-87 326.6 284 58.5
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 4.4e-87 325.5 234 67.9
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 7.7e-84 314.7 245 63.7
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.0e-83 314.3 193 76.2
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 1.5e-82 310.5 282 59.9
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.8e-80 303.5 248 60.5
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 4.0e-80 302.4 266 59.0
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.0e-79 300.1 266 58.6
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 5.7e-79 298.5 241 61.8
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 5.7e-79 298.5 246 58.5
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 5.7e-79 298.5 221 62.9
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 2.9e-78 296.2 292 55.1
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.1e-77 294.3 225 62.7
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 7.0e-77 291.6 178 76.4
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.5e-76 289.3 169 80.5
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 5.9e-76 288.5 172 80.2
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 7.8e-76 288.1 178 77.5
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 1.9e-74 283.5 276 55.1
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 6.2e-73 278.5 217 69.6
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 7.0e-69 265.0 170 74.7
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.7e-68 263.1 167 76.6
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 1.6e-65 253.8 204 59.3
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 5.2e-56 222.2 136 75.7
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 5.8e-55 218.8 153 67.3
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 3.0e-51 206.5 203 57.1
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 2.5e-50 203.4 131 72.5
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 5.2e-48 195.7 134 70.1
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 5.8e-47 192.2 216 45.4
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.2e-46 190.3 151 62.3
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 1.7e-43 180.6 209 47.4
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 3.9e-43 179.5 170 60.0
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 5.6e-42 175.6 145 58.6
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 6.2e-41 172.2 193 53.9
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 1.4e-29 134.4 91 68.1
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 2.1e-25 120.6 131 51.9
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.5e-21 107.1 90 55.6
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-19 100.5 127 45.7
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 9.6e-18 95.1 133 44.4
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.6e-17 94.4 62 71.0
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 7.9e-12 75.5 89 48.3
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 1.3e-11 74.7 50 62.0
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 3.0e-11 73.6 119 35.3
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 3.1e-08 63.5 186 29.0
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 9.0e-08 62.0 87 35.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 5.9e-07 59.3 54 53.7


User provided reference genes

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