Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9124 Avicennia marina HOM05D005304 ORTHO05D004438 7.6e-59 230.3 119 100.0
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 2.5e-17 92.4 100 53.0
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.1e-16 89.4 99 55.6
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 1.5e-14 83.2 103 49.5
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 2.2e-13 79.3 107 45.8
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 2.0e-11 72.8 113 39.8
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.7e-10 69.7 102 42.2
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.1e-09 67.0 105 37.1
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 1.4e-09 66.6 104 40.4
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 2.5e-09 65.9 118 42.4
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 9.4e-09 63.9 104 42.3
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 9.4e-09 63.9 114 38.6
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 2.1e-08 62.8 104 42.3
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 3.6e-08 62.0 103 44.7
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 3.6e-08 62.0 118 39.8
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 3.6e-08 62.0 104 41.3
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.4e-07 60.1 106 41.5
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.0e-07 58.9 71 52.1
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.9e-07 58.5 117 36.8
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 3.9e-07 58.5 94 39.4
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 5.1e-07 58.2 96 37.5
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 5.1e-07 58.2 116 38.8
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 6.7e-07 57.8 117 31.6
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 1.1e-06 57.0 62 53.2
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.1e-06 57.0 62 53.2
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.1e-06 57.0 62 53.2
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 1.1e-06 57.0 96 37.5
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 1.5e-06 56.6 66 47.0
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.5e-06 56.6 100 42.0
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 2.0e-06 56.2 102 41.2
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.0e-06 56.2 58 50.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 2.0e-06 56.2 110 33.6
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 2.0e-06 56.2 117 42.7
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 2.0e-06 56.2 115 36.5
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 2.6e-06 55.8 115 36.5
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 2.6e-06 55.8 62 51.6
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 3.3e-06 55.5 66 45.5
PGR142G4012 Punica granatum HOM05D005304 ORTHO05D016259 4.4e-06 55.1 74 44.6
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.7e-06 54.7 90 42.2
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 9.7e-06 53.9 101 37.6


User provided reference genes

Program Settings