Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 0.0e+00 1615.1 852 100.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 9.2e-292 1006.9 869 65.0
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 7.1e-276 954.1 862 63.1
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.1e-272 942.6 822 65.0
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 6.2e-272 941.0 798 64.7
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 8.1e-272 940.6 861 61.7
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 3.1e-271 938.7 761 65.8
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 2.0e-270 936.0 861 61.6
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 2.1e-267 926.0 830 62.5
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 5.1e-266 921.4 863 60.6
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.9e-265 919.5 815 62.3
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.6e-264 916.4 775 64.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 8.1e-264 914.1 803 63.4
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.4e-263 913.3 799 63.0
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 2.3e-258 896.0 792 62.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 2.1e-256 889.4 792 61.7
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 3.7e-256 888.6 799 62.6
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 8.2e-256 887.5 784 62.6
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.4e-255 886.7 832 60.7
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.4e-255 885.9 817 61.1
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 6.9e-255 884.4 796 62.1
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.2e-254 883.6 871 57.7
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.5e-254 883.2 796 61.7
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 3.8e-253 878.6 870 57.7
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 8.4e-253 877.5 866 58.1
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 4.2e-252 875.2 811 60.8
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 9.3e-252 874.0 802 61.0
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.3e-249 865.5 753 63.6
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 4.8e-248 861.7 756 63.5
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 8.2e-248 860.9 799 60.3
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.0e-246 856.3 829 58.7
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.4e-244 850.1 771 61.7
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 4.2e-244 848.6 802 59.7
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.6e-243 846.7 804 59.2
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 3.9e-242 842.0 808 59.3
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 4.3e-241 838.6 782 59.5
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 5.3e-239 831.6 804 59.0
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.0e-238 829.7 804 58.2
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.7e-237 826.6 796 59.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 7.2e-236 821.2 807 58.1
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.7e-235 818.5 813 58.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 4.1e-231 805.4 810 56.0
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 7.0e-231 804.7 796 58.0
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 9.1e-231 804.3 796 57.4
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 2.0e-230 803.1 722 61.4
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.0e-230 803.1 764 59.6
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 5.5e-228 795.0 790 58.2
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 9.4e-228 794.3 782 56.6
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.6e-227 793.5 803 56.9
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 2.1e-227 793.1 818 55.6
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.0e-226 790.8 796 56.7
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.8e-226 790.0 799 56.4
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 5.2e-226 788.5 801 55.7
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 6.7e-226 788.1 768 57.0
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.1e-225 787.3 820 54.9
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.1e-225 787.3 820 54.9
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.5e-225 786.9 779 57.5
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 3.3e-225 785.8 821 55.2
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.3e-224 783.9 803 56.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.7e-224 783.5 809 55.1
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.2e-224 783.1 788 56.6
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 2.8e-224 782.7 800 56.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.7e-224 782.3 810 54.8
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 4.8e-224 781.9 783 56.6
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 6.3e-224 781.6 876 54.3
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.4e-223 780.4 804 54.5
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 5.3e-223 778.5 778 57.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 5.3e-223 778.5 804 54.7
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 7.0e-223 778.1 790 56.5
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 1.5e-220 770.4 770 57.0
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 9.4e-220 767.7 894 53.0
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.7e-219 766.1 853 52.2
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 2.7e-219 766.1 772 55.8
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.7e-219 765.4 757 57.1
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 4.7e-219 765.4 805 55.3
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.6e-217 759.6 806 54.3
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.8e-213 745.7 901 50.1
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-212 744.2 817 55.1
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.1e-211 738.4 586 70.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 8.8e-210 734.6 793 53.6
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 2.4e-207 726.5 769 53.6
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.0e-201 706.8 814 51.4
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.5e-196 690.6 719 54.2
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.7e-192 677.2 807 49.4
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.4e-191 673.3 632 60.0
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.3e-184 651.0 586 63.0
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 4.9e-184 649.0 800 45.4
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.1e-183 647.9 775 50.1
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-176 624.4 577 62.6
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.9e-168 596.7 815 45.2
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 2.4e-167 593.6 542 61.1
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.1e-167 592.0 492 64.8
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 9.0e-162 575.1 864 45.0
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.1e-156 558.1 599 54.6
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.5e-156 557.0 726 47.5
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.3e-147 528.1 449 63.5
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.4e-146 523.9 598 52.0
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.9e-140 504.2 630 49.4
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 3.7e-139 500.0 884 41.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 6.5e-136 489.2 477 56.8
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 9.3e-135 485.3 479 56.6
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 9.7e-108 395.6 820 34.6
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 2.5e-95 354.4 842 33.0
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.8e-93 348.2 276 70.3
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.3e-88 332.0 282 64.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 8.6e-80 302.8 308 57.8
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 6.8e-77 293.1 365 44.7
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.1e-69 267.7 265 57.7
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 5.2e-69 266.9 205 68.8
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 4.1e-66 257.3 212 64.6
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 4.3e-63 247.3 630 31.1
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 2.5e-55 221.5 846 27.1
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 3.1e-53 214.5 867 25.8
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.7e-17 95.1 150 40.7
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 2.3e-16 92.0 145 41.4
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 1.8e-13 82.4 68 60.3
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 2.9e-11 75.1 113 43.4
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 5.0e-11 74.3 108 43.5
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.4e-10 72.8 112 43.8


User provided reference genes

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