Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 8.3e-108 393.7 190 100.0
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.0e-81 307.0 182 75.8
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 5.0e-81 304.7 182 77.5
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 5.0e-81 304.7 182 78.0
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 1.9e-80 302.8 182 74.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 6.2e-79 297.7 182 75.3
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 5.2e-78 294.7 182 75.3
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 6.8e-78 294.3 182 74.2
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 8.9e-78 293.9 182 72.5
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 1.2e-77 293.5 184 73.9
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 3.4e-77 292.0 182 74.7
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 9.8e-77 290.4 182 72.5
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 1.3e-76 290.0 184 73.4
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 2.4e-75 285.8 182 71.4
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.1e-75 285.0 182 72.5
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 4.1e-75 285.0 182 71.4
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 5.4e-75 284.6 183 71.6
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 7.1e-75 284.3 182 72.0
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 1.2e-74 283.5 182 72.5
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.6e-74 283.1 187 71.1
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.1e-74 282.7 182 70.3
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 2.1e-74 282.7 182 69.8
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.7e-74 282.3 182 69.8
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 4.6e-74 281.6 182 69.8
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 4.6e-74 281.6 182 72.0
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 4.6e-74 281.6 182 68.7
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.3e-73 280.0 183 72.1
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.7e-73 279.6 182 67.6
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.0e-73 278.9 182 69.2
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 3.0e-73 278.9 183 71.6
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 6.6e-73 277.7 182 70.3
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.1e-72 276.9 182 68.7
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 2.5e-72 275.8 182 67.6
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 3.3e-72 275.4 183 69.9
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 1.2e-71 273.5 182 68.7
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 1.2e-71 273.5 182 68.7
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.1e-71 272.7 182 66.5
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.8e-70 269.6 182 69.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.2e-69 266.9 182 63.7
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 2.6e-69 265.8 180 67.2
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 3.4e-69 265.4 182 64.3
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 3.4e-69 265.4 182 68.1
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 3.4e-69 265.4 182 68.1
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 5.8e-69 264.6 179 66.5
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.2e-68 262.7 183 65.0
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.1e-67 260.4 179 68.2
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.1e-67 260.4 183 64.5
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 1.9e-67 259.6 186 65.1
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 3.2e-67 258.8 182 66.5
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 9.2e-67 257.3 179 64.2
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.2e-66 256.9 182 66.5
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.6e-66 256.5 182 65.9
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-66 256.5 182 64.8
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.5e-66 255.4 188 63.8
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 4.6e-66 255.0 182 65.4
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 6.0e-66 254.6 182 64.3
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 7.8e-66 254.2 182 64.3
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 7.8e-66 254.2 183 65.0
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.0e-65 253.8 182 64.3
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.0e-65 253.8 182 64.3
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.3e-65 253.4 181 67.4
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 2.3e-65 252.7 182 63.7
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 3.0e-65 252.3 182 62.6
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.0e-65 252.3 182 64.3
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 3.9e-65 251.9 183 66.1
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 8.6e-65 250.8 182 64.3
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 8.6e-65 250.8 179 65.4
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.1e-64 250.4 182 63.7
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.1e-64 250.4 183 66.1
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.5e-64 250.0 182 64.3
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 1.5e-64 250.0 183 64.5
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.5e-64 250.0 183 65.0
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 3.3e-64 248.8 182 64.3
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 4.3e-64 248.4 182 63.2
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 9.6e-64 247.3 182 63.2
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.2e-63 246.9 180 63.9
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 1.6e-63 246.5 183 63.9
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 2.1e-63 246.1 182 62.1
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 6.2e-63 244.6 183 63.9
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 6.2e-63 244.6 180 63.3
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 6.2e-63 244.6 183 63.4
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 5.2e-62 241.5 182 61.0
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.0e-61 239.6 165 63.0
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 3.4e-61 238.8 184 62.0
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 7.6e-61 237.7 180 61.7
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.3e-60 236.9 182 61.0
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.1e-59 233.8 178 64.0
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.4e-59 233.4 183 63.9
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.4e-59 232.6 182 58.2
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 6.0e-58 228.0 182 57.1
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.0e-57 227.3 182 56.0
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.9e-56 223.0 180 57.2
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.1e-54 217.2 180 56.1
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 3.4e-53 212.2 182 59.3
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 3.8e-52 208.8 126 69.0
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 3.8e-52 208.8 147 59.2
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 2.7e-50 202.6 128 65.6
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 3.9e-49 198.7 179 48.0
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 8.7e-49 197.6 111 73.9
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 1.1e-48 197.2 180 47.8
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.1e-47 193.0 181 47.5
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 4.9e-44 181.8 181 49.2
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 8.4e-44 181.0 147 51.0
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.2e-42 177.2 180 46.1
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.6e-42 176.8 180 44.4
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 3.5e-42 175.6 181 48.1
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 8.7e-41 171.0 147 51.7
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.9e-40 169.9 179 52.0
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 3.3e-40 169.1 181 43.6
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.9e-27 126.7 106 59.4
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 1.9e-24 116.7 156 36.5
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.5e-16 89.7 70 64.3
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 2.4e-14 83.2 217 25.8


User provided reference genes

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