Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 6.4e-182 640.6 315 100.0
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.7e-148 528.9 305 83.3
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 2.4e-144 515.8 308 80.2
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 3.9e-139 498.4 319 76.5
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.5e-133 479.2 305 73.8
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.2e-133 477.6 305 75.7
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.2e-133 477.6 305 75.7
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 3.0e-131 472.2 305 73.8
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 5.2e-131 471.5 305 74.1
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 8.8e-131 470.7 305 72.5
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.0e-130 469.5 305 74.8
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 5.7e-130 468.0 307 73.6
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 3.1e-128 462.2 305 73.1
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 2.7e-127 459.1 307 71.3
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 7.7e-127 457.6 303 71.3
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 1.0e-126 457.2 306 70.9
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 1.3e-126 456.8 304 71.7
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 1.3e-126 456.8 305 70.2
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 1.7e-126 456.4 305 71.8
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 1.7e-126 456.4 305 70.5
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 2.9e-126 455.7 303 70.6
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 6.5e-126 454.5 303 71.0
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 8.5e-126 454.1 308 70.1
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 1.1e-125 453.8 314 70.1
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 1.1e-125 453.8 305 70.2
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 1.5e-125 453.4 308 70.1
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.9e-125 453.0 305 70.8
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 2.5e-125 452.6 305 70.5
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 3.2e-125 452.2 304 71.1
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 4.2e-125 451.8 308 70.1
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 5.5e-125 451.4 305 71.1
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 5.5e-125 451.4 309 70.2
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 9.4e-125 450.7 304 70.7
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 1.6e-124 449.9 305 71.1
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 2.7e-124 449.1 306 70.6
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 3.6e-124 448.7 305 69.5
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 4.7e-124 448.4 305 69.5
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 4.7e-124 448.4 305 70.8
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 1.8e-123 446.4 305 69.8
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 2.3e-123 446.0 304 70.4
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 2.3e-123 446.0 309 69.6
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 4.0e-123 445.3 305 69.2
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 4.0e-123 445.3 305 69.2
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 1.2e-122 443.7 305 68.2
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 2.0e-122 443.0 305 68.2
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 5.7e-122 441.4 305 69.8
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.3e-121 440.3 305 68.9
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.7e-121 439.9 306 68.6
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 2.8e-121 439.1 306 68.6
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 3.7e-121 438.7 306 68.3
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 3.7e-121 438.7 305 69.8
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 4.8e-121 438.3 305 66.9
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 6.3e-121 438.0 306 68.0
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 1.1e-120 437.2 305 68.5
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.1e-120 437.2 306 67.3
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.1e-120 437.2 305 68.2
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 1.4e-120 436.8 306 68.3
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.8e-120 436.4 306 68.6
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 3.1e-120 435.6 314 66.2
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.1e-120 435.6 306 67.6
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 5.4e-120 434.9 305 69.2
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 5.4e-120 434.9 306 68.6
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 5.4e-120 434.9 306 68.6
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 7.0e-120 434.5 309 68.3
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 7.0e-120 434.5 307 68.1
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 7.0e-120 434.5 305 66.2
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 1.2e-119 433.7 302 69.9
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 1.2e-119 433.7 305 66.6
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 2.0e-119 433.0 309 67.3
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 2.0e-119 433.0 306 68.3
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 5.9e-119 431.4 306 68.6
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 5.9e-119 431.4 306 67.3
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 7.7e-119 431.0 306 66.0
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 2.9e-118 429.1 307 67.1
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 3.8e-118 428.7 309 64.4
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.9e-117 426.4 305 66.6
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 7.2e-117 424.5 305 64.6
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 2.1e-116 422.9 355 60.6
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 3.6e-116 422.2 306 66.7
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 8.0e-116 421.0 305 66.6
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 8.0e-116 421.0 308 66.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 2.3e-115 419.5 284 69.7
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 6.8e-115 417.9 308 65.6
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.2e-114 417.2 313 64.5
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 3.4e-114 415.6 305 64.3
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 4.4e-114 415.2 332 59.9
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 5.7e-114 414.8 382 56.0
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 2.2e-113 412.9 323 61.9
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 2.8e-113 412.5 321 62.6
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 8.3e-113 411.0 309 65.7
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 1.1e-112 410.6 344 61.6
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 4.1e-112 408.7 277 70.0
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.2e-111 407.1 308 64.9
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 4.5e-111 405.2 307 61.9
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 1.1e-109 400.6 298 64.4
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 3.0e-107 392.5 308 63.3
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 6.4e-105 384.8 240 77.1
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 4.1e-104 382.1 305 62.6
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.0e-102 377.5 285 64.9
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 1.2e-100 370.5 245 71.8
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 2.3e-99 366.3 258 68.2
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 2.6e-98 362.8 306 59.8
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 3.2e-96 355.9 304 59.9
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 1.7e-94 350.1 258 67.1
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 2.6e-90 336.3 303 55.8
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 7.1e-88 328.2 241 63.1
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 1.0e-86 324.3 291 55.0
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 3.0e-86 322.8 209 71.3
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 8.1e-84 314.7 293 53.2
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 2.0e-82 310.1 228 64.9
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 2.8e-76 289.7 294 50.3
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 2.3e-70 270.0 291 46.4
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 9.9e-58 228.0 319 42.9
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 3.8e-57 226.1 180 58.9
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 2.1e-55 220.3 290 42.1
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.8e-54 217.2 148 70.9
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 1.9e-53 213.8 158 62.0
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 6.2e-52 208.8 146 70.5
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.5e-42 177.6 187 54.5
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.0e-38 164.9 149 57.0
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 3.2e-32 143.3 149 48.3
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 6.3e-28 129.0 106 58.5
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 2.6e-26 123.6 96 63.5
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 3.4e-26 123.2 100 59.0
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 2.4e-19 100.5 59 76.3
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 4.1e-19 99.8 67 68.7
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.6e-18 97.1 70 62.9
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.0e-17 92.8 67 64.2
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.1e-16 91.7 62 67.7


User provided reference genes

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