Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8927 Avicennia marina HOM05D003877 ORTHO05D004647 5.7e-294 1013.4 493 100.0
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 4.0e-231 804.7 496 77.4
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 4.6e-219 764.6 535 70.1
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 2.5e-217 758.8 482 76.6
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 1.3e-213 746.5 490 73.7
SalBow3G1521 Salvia bowleyana HOM05D003877 ORTHO05D004647 8.4e-213 743.8 632 60.4
SGA_v2.0_scaffold85G26692 Striga asiatica HOM05D003877 ORTHO05D004647 2.5e-212 742.3 487 73.7
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 6.9e-207 724.2 493 70.8
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.7e-205 719.5 492 69.9
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 1.2e-203 713.4 501 67.7
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 2.2e-200 702.6 477 70.4
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 6.3e-200 701.0 504 67.3
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 8.2e-200 700.7 490 67.8
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 4.1e-199 698.4 493 68.2
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 9.1e-199 697.2 467 70.9
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 2.0e-198 696.0 497 68.2
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 2.6e-198 695.7 467 69.4
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 4.5e-198 694.9 499 67.7
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 1.3e-197 693.3 473 69.1
PGSC0003DMG400030038 Solanum tuberosum HOM05D003877 ORTHO05D004647 8.5e-197 690.6 477 68.3
Sopen06g016790 Solanum pennellii HOM05D003877 ORTHO05D004647 2.7e-195 685.6 465 69.7
Solyc06g050990.3 Solanum lycopersicum HOM05D003877 ORTHO05D004647 3.6e-195 685.3 465 69.5
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.0e-194 682.2 518 64.7
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 5.1e-194 681.4 478 66.9
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 1.1e-193 680.2 471 67.9
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 4.4e-193 678.3 465 69.7
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 4.4e-193 678.3 469 68.0
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 7.4e-193 677.6 475 66.7
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.7e-192 675.2 516 64.5
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 4.8e-192 674.9 467 67.2
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 6.3e-192 674.5 501 64.3
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 6.3e-192 674.5 495 65.9
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 6.3e-192 674.5 460 69.3
Cpa.g.sc19.135 Carica papaya HOM05D003877 ORTHO05D004647 8.2e-192 674.1 458 68.6
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.1e-191 673.7 457 70.9
Glyma.18G024700 Glycine max HOM05D003877 ORTHO05D004647 1.2e-190 670.2 478 66.3
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 1.5e-190 669.8 478 66.1
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 2.0e-190 669.5 495 65.7
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 1.0e-189 667.2 488 65.2
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 1.7e-189 666.4 475 64.8
Lalb_Chr08g0231521 Lupinus albus HOM05D003877 ORTHO05D004647 2.2e-189 666.0 466 66.5
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 2.2e-189 666.0 578 56.9
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 5.0e-189 664.8 481 65.5
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 5.0e-189 664.8 471 66.9
Potri.008G072600 Populus trichocarpa HOM05D003877 ORTHO05D004647 2.5e-188 662.5 479 66.4
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 4.2e-188 661.8 455 68.4
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 5.5e-188 661.4 477 65.4
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 9.4e-188 660.6 477 65.0
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 9.4e-188 660.6 477 65.0
Duzib106G1591 Durio zibethinus HOM05D003877 ORTHO05D004647 1.6e-187 659.8 476 65.8
Lalb_Chr23g0277091 Lupinus albus HOM05D003877 ORTHO05D004647 2.1e-187 659.4 479 65.6
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 2.1e-187 659.4 482 63.7
arahy.Tifrunner.gnm1.ann1.EHZF9M Arachis hypogaea HOM05D003877 ORTHO05D004647 2.7e-187 659.1 486 62.8
Dinv21772 Davidia involucrata HOM05D003877 ORTHO05D004647 3.6e-187 658.7 424 74.3
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 4.7e-187 658.3 477 65.0
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 4.7e-187 658.3 454 67.2
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 8.0e-187 657.5 484 65.1
CSS0004354 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.0e-186 657.1 434 71.4
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.8e-186 656.4 477 64.4
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.8e-186 656.4 477 62.5
CANSAT56G2949 Cannabis sativa HOM05D003877 ORTHO05D004647 5.2e-186 654.8 500 63.8
CiPaw.02G195400 Carya illinoinensis HOM05D003877 ORTHO05D004647 6.7e-186 654.4 470 65.5
Phvul.006G048800 Phaseolus vulgaris HOM05D003877 ORTHO05D004647 8.8e-186 654.1 482 64.3
arahy.Tifrunner.gnm1.ann1.ZCM4RK Arachis hypogaea HOM05D003877 ORTHO05D004647 2.0e-185 652.9 491 62.1
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.0e-185 652.9 477 62.3
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 4.4e-185 651.7 479 64.5
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 5.7e-185 651.4 464 65.5
Prupe.2G255400 Prunus persica HOM05D003877 ORTHO05D004647 5.7e-185 651.4 467 67.7
ECA233G0637 Erigeron canadensis HOM05D003877 ORTHO05D004647 9.7e-185 650.6 456 66.2
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.2e-184 649.4 477 62.1
Carub.0001s0925 Capsella rubella HOM05D003877 ORTHO05D004647 6.3e-184 647.9 491 62.9
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.1e-183 647.1 465 64.7
arahy.Tifrunner.gnm1.ann1.EJG72V Arachis hypogaea HOM05D003877 ORTHO05D004647 1.4e-183 646.7 465 64.5
AL1G20470 Arabidopsis lyrata HOM05D003877 ORTHO05D004647 2.4e-183 646.0 491 62.3
AUR62022935 Chenopodium quinoa HOM05D003877 ORTHO05D004647 3.1e-183 645.6 489 61.6
AT1G09870 Arabidopsis thaliana HOM05D003877 ORTHO05D004647 7.0e-183 644.4 478 62.6
Haze_17269 Corylus avellana HOM05D003877 ORTHO05D004647 7.0e-183 644.4 461 65.9
Hund13891 Selenicereus undatus HOM05D003877 ORTHO05D004647 9.1e-183 644.0 481 64.0
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.6e-182 643.3 440 66.6
Potri.010G184600 Populus trichocarpa HOM05D003877 ORTHO05D004647 1.6e-182 643.3 474 64.3
AUR62012296 Chenopodium quinoa HOM05D003877 ORTHO05D004647 2.0e-182 642.9 489 61.3
Sp1g08500 Schrenkiella parvula HOM05D003877 ORTHO05D004647 2.0e-182 642.9 491 62.7
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 3.5e-182 642.1 477 63.9
CARHR009900 Cardamine hirsuta HOM05D003877 ORTHO05D004647 5.9e-182 641.3 482 62.7
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 5.9e-182 641.3 483 63.4
QL08p063706 Quercus lobata HOM05D003877 ORTHO05D004647 7.7e-182 641.0 490 62.4
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 2.9e-181 639.0 502 62.5
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 2.9e-181 639.0 465 64.1
Gohir.D04G070400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 3.8e-181 638.6 453 66.4
Thhalv10007485m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 5.0e-181 638.3 484 61.6
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 1.1e-180 637.1 478 63.0
Manes.07G134500 Manihot esculenta HOM05D003877 ORTHO05D004647 1.1e-180 637.1 436 68.3
BraA06t23872Z Brassica rapa HOM05D003877 ORTHO05D004647 1.9e-180 636.3 478 63.2
Sed0008918 Sechium edule HOM05D003877 ORTHO05D004647 6.7e-178 627.9 492 62.0
A06p06580 Brassica napus HOM05D003877 ORTHO05D004647 1.5e-177 626.7 478 62.1
BcaC07g41857 Brassica carinata HOM05D003877 ORTHO05D004647 2.0e-177 626.3 493 61.5
C08p49240 Brassica napus HOM05D003877 ORTHO05D004647 2.0e-177 626.3 493 61.5
BolC8t52459H Brassica oleracea HOM05D003877 ORTHO05D004647 2.0e-177 626.3 493 61.5
BraA09t41875Z Brassica rapa HOM05D003877 ORTHO05D004647 3.3e-177 625.5 487 61.0
A09p65300 Brassica napus HOM05D003877 ORTHO05D004647 5.7e-177 624.8 487 61.0
THA.LOC104824338 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 5.7e-177 624.8 455 64.0
PGSC0003DMG400027120 Solanum tuberosum HOM05D003877 ORTHO05D004647 9.7e-177 624.0 427 70.5
Sc11g0005270 Simmondsia chinensis HOM05D003877 ORTHO05D004647 1.1e-175 620.5 457 65.2
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 1.4e-175 620.2 457 62.1
BolC5t29551H Brassica oleracea HOM05D003877 ORTHO05D004647 1.8e-175 619.8 491 60.7
Sabra10G0141800 Salix brachista HOM05D003877 ORTHO05D004647 2.4e-175 619.4 507 59.2
Hund15887 Selenicereus undatus HOM05D003877 ORTHO05D004647 7.0e-175 617.8 470 62.6
C05p07990 Brassica napus HOM05D003877 ORTHO05D004647 1.2e-174 617.1 491 60.3
Aa31LG1G5020 Aethionema arabicum HOM05D003877 ORTHO05D004647 1.6e-174 616.7 475 60.8
CSS0043221 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.6e-174 616.7 396 72.5
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 8.5e-173 610.9 453 64.5
Sabra08G0053900 Salix brachista HOM05D003877 ORTHO05D004647 1.5e-172 610.1 511 59.7
BcaC05g24837 Brassica carinata HOM05D003877 ORTHO05D004647 1.9e-172 609.8 455 62.4
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 2.5e-172 609.4 466 61.4
CSS0044757 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.2e-172 607.8 372 75.5
CDE04G1002 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 1.2e-169 600.5 505 59.2
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 3.4e-169 599.0 573 52.7
CsaV3_5G010390 Cucumis sativus L. HOM05D003877 ORTHO05D004647 5.7e-169 598.2 454 63.7
PSO349G0168 Papaver somniferum HOM05D003877 ORTHO05D004647 6.3e-168 594.7 469 58.6
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 1.4e-167 593.6 500 59.4
MELO3C018375.2 Cucumis melo HOM05D003877 ORTHO05D004647 5.9e-166 588.2 467 61.2
Lsat_1_v5_gn_9_60880 Lactuca sativa HOM05D003877 ORTHO05D004647 2.9e-165 585.9 437 64.8
Os03g0818100 Oryza sativa ssp. japonica HOM05D003877 ORTHO05D004647 8.6e-165 584.3 496 57.9
PSO339G0345 Papaver somniferum HOM05D003877 ORTHO05D004647 4.2e-164 582.0 474 58.0
Prupe.6G130900 Prunus persica HOM05D003877 ORTHO05D004647 8.0e-163 577.8 484 60.5
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 1.0e-162 577.4 478 58.6
ClCG07G004500 Citrullus lanatus HOM05D003877 ORTHO05D004647 1.8e-162 576.6 427 62.8
Thhalv10002208m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 8.9e-162 574.3 422 62.3
Sed0009338 Sechium edule HOM05D003877 ORTHO05D004647 3.7e-160 568.9 453 61.4
Zm00001eb062330 Zea mays HOM05D003877 ORTHO05D004647 6.3e-160 568.2 498 57.2
MELO3C034227.2 Cucumis melo HOM05D003877 ORTHO05D004647 1.8e-159 566.6 498 57.0
ATR0681G014 Amborella trichopoda HOM05D003877 ORTHO05D004647 1.3e-157 560.5 427 62.5
Atru.chr12.96 Acer truncatum HOM05D003877 ORTHO05D004647 1.5e-156 557.0 439 61.3
CsaV3_5G010430 Cucumis sativus L. HOM05D003877 ORTHO05D004647 8.0e-155 551.2 480 59.0
CsaV3_5G010400 Cucumis sativus L. HOM05D003877 ORTHO05D004647 8.9e-138 494.6 466 54.9
Solyc05g052480.4 Solanum lycopersicum HOM05D003877 ORTHO05D004647 5.4e-135 485.3 334 70.1
CSS0003433 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.8e-134 481.5 363 65.0
Mapoly0029s0098 Marchantia polymorpha HOM05D003877 ORTHO05D004647 6.8e-130 468.4 500 47.0
Pp3c24_6790 Physcomitrium patens HOM05D003877 ORTHO05D004647 2.9e-128 463.0 488 45.9
SalBow3G0419 Salvia bowleyana HOM05D003877 ORTHO05D004647 3.8e-128 462.6 269 81.8
CDE06G2086 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 4.2e-127 459.1 476 51.5
SMO271G0017 Selaginella moellendorffii HOM05D003877 ORTHO05D004647 4.3e-124 449.1 443 49.9
Pp3c8_15050 Physcomitrium patens HOM05D003877 ORTHO05D004647 3.5e-118 429.5 407 48.9
AagrBONN_evm.TU.Sc2ySwM_344.2788 Anthoceros agrestis HOM05D003877 ORTHO05D004647 1.1e-111 407.9 524 43.1
HPP92_019712 Vanilla planifolia HOM05D003877 ORTHO05D004647 7.6e-105 385.2 300 60.7
SalBow3G3178 Salvia bowleyana HOM05D003877 ORTHO05D004647 1.1e-95 354.8 211 77.3
unitig_8.g4098 Utricularia gibba HOM05D003877 ORTHO05D004647 5.5e-95 352.4 333 54.4
SGA_v2.0_scaffold85G26702 Striga asiatica HOM05D003877 ORTHO05D004647 3.9e-69 266.5 217 63.6
CsaV3_2G012250 Cucumis sativus L. HOM05D003877 ORTHO05D004647 2.2e-64 250.8 183 63.9
SEGI_29662 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 4.2e-47 193.4 151 60.3
CBR_g38028 Chara braunii HOM05D003877 ORTHO05D004647 2.4e-42 177.6 301 35.5
Manes.09G077219 Manihot esculenta HOM05D003877 ORTHO05D004647 4.7e-38 163.3 101 75.2
Cre13.g568600 Chlamydomonas reinhardtii HOM05D003877 ORTHO05D004647 8.9e-37 159.1 440 28.6
TPR.G10202 Trifolium pratense HOM05D003877 ORTHO05D004647 7.0e-34 149.4 106 64.2
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 2.7e-33 147.5 149 53.7
Lsat_1_v5_gn_5_175980 Lactuca sativa HOM05D003877 ORTHO05D004647 1.0e-32 145.6 110 61.8
Manes.18G042850 Manihot esculenta HOM05D003877 ORTHO05D004647 1.1e-31 142.1 117 64.1
unitig_8.g4097 Utricularia gibba HOM05D003877 ORTHO05D004647 1.1e-31 142.1 97 66.0
Manes.06G044901 Manihot esculenta HOM05D003877 ORTHO05D004647 1.6e-30 138.3 112 63.4
CsaV3_2G012240 Cucumis sativus L. HOM05D003877 ORTHO05D004647 5.4e-26 123.2 86 64.0
SEGI_27537 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 5.1e-24 116.7 79 64.6
Nn5g28638 Nelumbo nucifera HOM05D003877 ORTHO05D004647 8.9e-21 105.9 70 67.1
CSS0015783 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.5e-20 105.1 112 56.2
TPR.G5082 Trifolium pratense HOM05D003877 ORTHO05D004647 2.9e-19 100.9 70 60.0
Carub.0003s0920 Capsella rubella HOM05D000468 ORTHO05D114682 3.5e-17 94.0 70 70.0
Nn7g36267 Nelumbo nucifera HOM05D003877 ORTHO05D004647 3.5e-17 94.0 61 68.9
Manes.15G188901 Manihot esculenta HOM05D003877 ORTHO05D004647 4.9e-11 73.6 48 68.8
MELO3C018376.2 Cucumis melo HOM05D003877 ORTHO05D004647 2.7e-09 67.8 45 64.4
TPR.G5048 Trifolium pratense HOM05D003877 ORTHO05D004647 4.6e-09 67.0 72 48.6
MELO3C033083.2 Cucumis melo HOM05D003877 ORTHO05D034944 7.8e-09 66.2 39 76.9
TPR.G30156 Trifolium pratense HOM05D003877 ORTHO05D004647 1.3e-08 65.5 71 45.1
CSS0003201 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.5e-07 62.0 63 49.2


User provided reference genes

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