Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 4.3e-89 331.3 164 100.0
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.9e-50 200.7 163 64.4
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.9e-50 200.7 163 64.4
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 3.4e-49 198.7 164 63.4
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.8e-43 179.1 134 66.4
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.8e-42 176.4 162 58.0
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 2.3e-42 176.0 161 57.1
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 6.8e-42 174.5 131 66.4
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.7e-40 169.9 138 60.9
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.2e-40 169.5 131 68.7
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 8.3e-40 167.5 160 56.9
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 3.2e-39 165.6 155 57.4
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 5.4e-39 164.9 132 65.2
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 5.4e-39 164.9 113 74.3
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.6e-38 163.3 116 70.7
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 7.8e-38 161.0 112 71.4
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 2.3e-37 159.5 157 52.9
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.9e-37 158.7 125 61.6
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 3.9e-37 158.7 134 61.2
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 6.6e-37 157.9 112 73.2
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.5e-36 156.8 105 71.4
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.9e-36 156.4 164 52.4
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.9e-36 156.4 158 56.3
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 1.9e-36 156.4 166 50.6
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.2e-35 153.7 158 54.4
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.2e-35 153.7 158 54.4
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.2e-35 153.7 134 58.2
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.6e-35 153.3 162 51.9
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 8.0e-35 151.0 107 68.2
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.1e-34 150.6 130 56.9
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.4e-34 150.2 107 68.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.3e-34 149.4 113 66.4
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.3e-34 149.4 169 51.5
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 4.0e-34 148.7 128 60.2
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.2e-33 147.1 113 65.5
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.0e-33 146.4 142 56.3
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 3.4e-33 145.6 167 49.1
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 4.4e-33 145.2 161 50.9
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.3e-32 143.7 129 58.9
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 4.9e-32 141.7 129 57.4
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 4.9e-32 141.7 129 57.4
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 6.4e-32 141.4 132 57.6
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 6.4e-32 141.4 129 57.4
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 6.4e-32 141.4 129 57.4
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 6.4e-32 141.4 129 57.4
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 6.4e-32 141.4 145 53.8
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.4e-31 140.2 103 65.0
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 2.4e-31 139.4 105 65.7
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.2e-31 139.0 122 60.7
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 5.4e-31 138.3 137 55.5
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 5.4e-31 138.3 106 65.1
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 7.0e-31 137.9 106 65.1
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 7.0e-31 137.9 131 58.8
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 9.2e-31 137.5 162 46.3
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.2e-30 137.1 152 51.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.6e-30 136.7 106 64.2
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 1.6e-30 136.7 105 64.8
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.6e-30 136.7 122 59.8
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.7e-30 136.0 132 56.8
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 6.0e-30 134.8 116 60.3
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.7e-29 133.3 119 58.8
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.9e-28 129.8 81 76.5
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 2.5e-28 129.4 71 81.7
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.3e-28 129.0 70 80.0
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 4.3e-28 128.6 100 63.0
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 5.6e-28 128.3 93 65.6
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 7.3e-28 127.9 81 74.1
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 1.6e-27 126.7 121 57.0
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 2.8e-27 125.9 85 69.4
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 4.7e-27 125.2 105 58.1
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 4.7e-27 125.2 133 52.6
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 4.7e-27 125.2 93 61.3
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.1e-26 124.0 72 76.4
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 3.1e-26 122.5 140 50.7
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.0e-26 122.1 82 65.9
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 5.2e-26 121.7 132 52.3
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 5.2e-26 121.7 131 48.9
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.2e-26 121.7 82 65.9
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 6.8e-26 121.3 99 57.6
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 6.8e-26 121.3 146 45.2
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.2e-25 120.6 92 63.0
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.2e-25 120.6 90 67.8
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.2e-25 120.6 145 45.5
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.2e-25 120.6 145 45.5
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.0e-25 119.8 103 60.2
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 2.6e-25 119.4 102 58.8
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 2.6e-25 119.4 76 71.1
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.3e-24 117.1 128 50.0
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 2.2e-24 116.3 95 61.1
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.2e-24 116.3 148 43.9
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 2.9e-24 115.9 113 54.0
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 6.4e-24 114.8 105 54.3
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.2e-23 112.5 124 48.4
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 4.6e-22 108.6 137 42.3
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.3e-21 107.1 109 55.0
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 1.3e-21 107.1 79 68.4
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.6e-19 100.1 83 59.0
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.2e-17 94.0 71 59.2
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 4.6e-14 82.0 114 38.6
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 5.8e-09 65.1 98 35.7


User provided reference genes

Program Settings