Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 0.0e+00 2296.5 1163 100.0
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 0.0e+00 1130.5 1188 57.5
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 2.3e-269 932.9 1193 49.9
Migut.F00307 Erythranthe guttata HOM05D006627 ORTHO05D007753 1.1e-199 701.4 1206 45.0
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 1.3e-171 608.2 1222 39.6
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 4.5e-124 450.3 1244 33.9
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 1.2e-113 415.6 1238 32.2
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.3e-89 335.9 1253 32.2
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 1.3e-86 325.9 1309 30.1
unitig_46.g18802 Utricularia gibba HOM05D006627 ORTHO05D007753 1.0e-83 316.2 1121 31.3
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 4.3e-82 310.8 1248 30.8
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 1.0e-75 289.7 1105 31.5
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 3.9e-75 287.7 1109 30.5
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 1.6e-73 282.3 1083 30.4
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 2.8e-73 281.6 1237 28.1
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 2.8e-73 281.6 1091 30.2
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.4e-61 242.7 1223 28.5
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.6e-55 221.9 1220 28.4
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 6.1e-52 210.7 1251 27.7
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 7.9e-52 210.3 1242 28.0
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 3.0e-51 208.4 1228 26.0
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 7.4e-50 203.8 1267 26.1
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 3.7e-49 201.4 1329 26.3
unitig_747.g21861 Utricularia gibba HOM05D006627 ORTHO05D007753 4.8e-49 201.1 818 32.2
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 6.3e-49 200.7 1074 29.4
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 6.3e-49 200.7 1074 29.4
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 1.2e-47 196.4 1170 28.5
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 2.6e-47 195.3 1274 27.2
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.0e-46 193.4 1235 27.9
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 3.8e-46 191.4 1282 26.5
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.2e-45 188.3 1415 26.2
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 1.4e-43 183.0 1398 25.9
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 6.7e-43 180.6 1462 25.7
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.6e-42 178.7 1224 26.4
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 3.7e-41 174.9 1211 26.0
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.3e-41 174.1 1200 26.0
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 1.4e-40 172.9 1220 27.0
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 2.4e-40 172.2 1290 25.8
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 7.0e-40 170.6 1214 25.9
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 1.5e-37 162.9 1239 25.5
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 3.2e-37 161.8 1280 24.7
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 4.2e-37 161.4 1451 24.9
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 2.7e-36 158.7 223 46.2
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.6e-36 158.3 1235 25.8
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 3.6e-36 158.3 1239 25.7
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 4.7e-36 157.9 600 32.7
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 1.4e-35 156.4 1239 25.7
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.8e-35 156.0 1269 26.1
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.1e-34 153.3 1266 25.2
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 1.5e-34 152.9 1257 25.1
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.0e-34 152.5 1278 25.5
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.8e-33 148.7 1264 25.0
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.8e-33 148.7 1267 24.9
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 6.3e-33 147.5 1262 25.2
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.0e-32 144.1 1220 24.2
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 2.5e-29 135.6 1254 24.8
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 4.0e-27 128.3 1278 24.6
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 9.8e-26 123.6 457 31.3
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 2.4e-24 119.0 1352 23.2
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 4.1e-24 118.2 1354 24.6
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 4.1e-24 118.2 1227 24.1
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 5.4e-24 117.9 1301 24.5
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 1.6e-23 116.3 1262 23.7
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 2.0e-23 115.9 1180 23.7
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 2.5e-21 109.0 1181 24.7
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 2.5e-21 109.0 1181 24.7
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.5e-21 109.0 1307 24.1
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 7.2e-21 107.5 300 37.0
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 2.1e-20 105.9 1185 24.8
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.4e-19 103.2 928 25.3
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 6.8e-19 100.9 1239 24.3
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 7.5e-18 97.4 1103 25.3
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 1.7e-17 96.3 1380 23.6
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 6.3e-17 94.4 1373 23.5
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 1.6e-15 89.7 1312 23.4
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.0e-15 89.4 1271 24.1
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 3.5e-15 88.6 1199 24.9
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 7.7e-15 87.4 555 25.9
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 1.7e-14 86.3 370 28.6
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.9e-13 82.8 1298 24.2
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 1.9e-13 82.8 1280 23.6
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.3e-13 82.0 1295 23.6
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 6.8e-11 74.3 561 26.6
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 5.7e-10 71.2 1177 22.7
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 1.8e-08 66.2 1197 23.9
unitig_52.g17733 Utricularia gibba HOM05D006627 ORTHO05D007753 5.4e-08 64.7 962 23.7
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 1.2e-07 63.5 1269 22.5
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 3.5e-07 62.0 1327 24.0
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 5.9e-07 61.2 303 27.1
HanXRQChr14g0462471 Helianthus annuus HOM05D029832 ORTHO05D007753 1.0e-06 60.5 280 28.9
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 2.3e-06 59.3 214 30.8
unitig_37.g11967 Utricularia gibba HOM05D006627 ORTHO05D007753 2.9e-06 58.9 369 27.6
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 5.0e-06 58.2 1391 23.1
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 6.6e-06 57.8 283 27.6


User provided reference genes

Program Settings