Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8708 Avicennia marina HOM05D000607 ORTHO05D088100 9.6e-24 114.4 58 100.0
MSTRG.8706 Avicennia marina HOM05D000607 ORTHO05D000518 2.3e-09 66.6 75 57.3
MSTRG.27080 Avicennia marina HOM05D000607 ORTHO05D000518 1.9e-08 63.5 80 53.8
Migut.F00284 Erythranthe guttata HOM05D000607 ORTHO05D000518 1.9e-08 63.5 78 51.3
Peaxi162Scf00444g00231 Petunia axillaris HOM05D000607 ORTHO05D000518 9.6e-08 61.2 77 51.9
Nitab4.5_0006014g0030 Nicotiana tabacum HOM05D000607 ORTHO05D000518 1.3e-07 60.8 78 50.0
Actinidia34160 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.6e-07 60.5 78 50.0
Solyc03g007870.3 Solanum lycopersicum HOM05D000607 ORTHO05D000518 2.1e-07 60.1 78 47.4
Sopen03g003810 Solanum pennellii HOM05D000607 ORTHO05D000518 2.1e-07 60.1 78 47.4
PGSC0003DMG400009507 Solanum tuberosum HOM05D000607 ORTHO05D000518 2.1e-07 60.1 78 47.4
PGSC0003DMG400031424 Solanum tuberosum HOM05D000607 ORTHO05D000518 2.1e-07 60.1 78 47.4
Nitab4.5_0007116g0010 Nicotiana tabacum HOM05D000607 ORTHO05D000518 2.8e-07 59.7 78 48.7
SalBow4G3096 Salvia bowleyana HOM05D000607 ORTHO05D000518 3.7e-07 59.3 44 70.5
CAN.G126.32 Capsicum annuum HOM05D000607 ORTHO05D000518 4.8e-07 58.9 78 47.4
Dinv28383 Davidia involucrata HOM05D000607 ORTHO05D000518 6.2e-07 58.5 80 50.0
Manes.14G021900 Manihot esculenta HOM05D000607 ORTHO05D000518 6.2e-07 58.5 78 51.3
Actinidia08584 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.4e-06 57.4 44 70.5
HanXRQChr12g0381131 Helianthus annuus HOM05D000607 ORTHO05D000518 1.4e-06 57.4 77 48.1
Medtr6g049280 Medicago truncatula HOM05D000607 ORTHO05D000518 1.4e-06 57.4 79 45.6
Medtr6g049320 Medicago truncatula HOM05D000607 ORTHO05D000518 1.4e-06 57.4 79 45.6
Lj5g0023591 Lotus japonicus HOM05D000607 ORTHO05D000518 2.4e-06 56.6 78 44.9
vmacro06623 Vaccinium macrocarpon HOM05D000607 ORTHO05D000518 2.4e-06 56.6 78 47.4
Prupe.2G301600 Prunus persica HOM05D000607 ORTHO05D000518 3.1e-06 56.2 75 50.7
CAN.G311.74 Capsicum annuum HOM05D000607 ORTHO05D000518 4.0e-06 55.8 78 47.4
Dinv35259 Davidia involucrata HOM05D000607 ORTHO05D000518 5.3e-06 55.5 78 46.2
MD01G1209100 Malus domestica HOM05D000607 ORTHO05D000518 5.3e-06 55.5 76 50.0
MD01G1209200 Malus domestica HOM05D000607 ORTHO05D000518 5.3e-06 55.5 76 50.0
Manes.06G153100 Manihot esculenta HOM05D000607 ORTHO05D000518 5.3e-06 55.5 76 50.0
HanXRQChr15g0494131 Helianthus annuus HOM05D000607 ORTHO05D000518 6.9e-06 55.1 73 47.9
Lalb_Chr06g0161361 Lupinus albus HOM05D000607 ORTHO05D000518 6.9e-06 55.1 79 46.8
arahy.Tifrunner.gnm1.ann1.FB6B2S Arachis hypogaea HOM05D000607 ORTHO05D000518 9.0e-06 54.7 78 44.9
Lsat_1_v5_gn_9_56680 Lactuca sativa HOM05D000607 ORTHO05D000518 9.0e-06 54.7 44 65.9
Phvul.007G074900 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 9.0e-06 54.7 77 45.5
Phvul.007G075000 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 9.0e-06 54.7 77 45.5
Solyc06g036310.3 Solanum lycopersicum HOM05D000607 ORTHO05D000518 9.0e-06 54.7 78 44.9
unitig_37.g12541 Utricularia gibba HOM05D000607 ORTHO05D000518 9.0e-06 54.7 44 61.4


User provided reference genes

Program Settings