Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 0.0e+00 1127.1 573 100.0
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 1.1e-227 793.5 567 75.1
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 2.0e-210 736.1 561 69.5
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 2.9e-196 689.1 563 65.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 4.1e-195 685.3 581 62.8
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 7.3e-192 674.5 540 65.6
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.2e-191 673.7 564 64.0
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 1.2e-191 673.7 570 62.5
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.1e-190 669.1 565 63.4
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 4.0e-190 668.7 565 63.4
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 1.2e-189 667.2 564 62.9
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.5e-189 666.8 567 63.3
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.9e-188 662.5 566 62.5
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 1.4e-187 660.2 556 61.7
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 2.4e-187 659.4 518 64.5
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 9.2e-187 657.5 556 61.5
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 7.8e-186 654.4 552 61.6
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 7.3e-184 647.9 547 62.5
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 2.1e-183 646.4 564 60.8
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 8.1e-183 644.4 544 61.9
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 2.4e-182 642.9 574 61.5
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 2.0e-181 639.8 473 70.0
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 9.9e-181 637.5 552 61.2
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 1.3e-180 637.1 562 60.9
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 1.3e-180 637.1 570 59.6
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.7e-180 636.7 471 69.9
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 1.7e-180 636.7 550 62.2
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 8.4e-180 634.4 473 69.3
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 1.1e-179 634.0 559 61.9
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 4.2e-179 632.1 473 69.1
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 1.2e-178 630.6 551 60.3
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 2.1e-178 629.8 560 60.2
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 3.5e-178 629.0 470 69.1
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 3.9e-177 625.5 589 59.6
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 6.6e-177 624.8 480 68.1
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 6.6e-177 624.8 571 61.6
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 3.3e-176 622.5 590 56.1
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 7.3e-176 621.3 573 58.1
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 2.1e-175 619.8 545 60.7
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 4.8e-175 618.6 568 58.6
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 8.1e-175 617.8 558 60.9
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 1.4e-174 617.1 471 67.9
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 1.4e-174 617.1 557 60.1
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.8e-174 616.7 483 65.2
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.8e-174 616.7 559 60.1
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 3.1e-174 615.9 560 60.5
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 3.1e-174 615.9 537 60.7
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 1.5e-173 613.6 475 65.5
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 2.6e-173 612.8 558 60.0
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 5.8e-173 611.7 561 59.9
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.3e-172 610.5 558 60.4
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 1.3e-172 610.5 565 57.9
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.1e-171 607.4 547 59.8
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 1.9e-171 606.7 560 60.0
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.7e-170 602.8 439 67.2
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 8.7e-169 597.8 526 58.9
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.1e-168 597.4 542 59.0
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 1.6e-167 593.6 551 57.2
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.7e-167 592.4 551 58.4
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 8.1e-167 591.3 418 70.6
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 1.1e-166 590.9 557 57.8
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 1.4e-166 590.5 557 58.0
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 2.4e-166 589.7 557 57.8
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 9.0e-166 587.8 552 56.9
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 1.2e-165 587.4 435 67.8
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 3.4e-165 585.9 503 60.0
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 5.8e-165 585.1 558 57.3
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 2.2e-164 583.2 557 57.6
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 2.9e-164 582.8 557 57.6
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 6.4e-164 581.6 567 57.8
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 8.4e-164 581.3 562 56.0
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 2.4e-163 579.7 466 62.0
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 4.2e-163 578.9 558 58.8
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 7.1e-163 578.2 552 56.7
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 9.3e-163 577.8 565 58.2
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.6e-162 577.0 530 59.2
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.6e-162 577.0 530 59.1
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 2.7e-162 576.2 553 56.1
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.6e-162 575.5 528 58.9
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 6.0e-162 575.1 535 58.3
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 7.9e-162 574.7 561 57.8
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 7.9e-162 574.7 549 56.8
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 1.8e-161 573.5 552 57.2
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.3e-161 573.2 528 58.7
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.9e-161 572.4 529 59.0
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.1e-161 572.0 529 59.0
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 4.5e-157 558.9 537 57.9
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 5.8e-157 558.5 559 55.5
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 4.9e-156 555.4 544 57.0
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 4.2e-155 552.4 468 63.2
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 5.5e-155 552.0 460 62.2
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 2.2e-151 540.0 449 61.7
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 2.8e-151 539.7 436 62.2
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 1.4e-150 537.3 571 53.9
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 2.9e-148 529.6 695 45.9
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 6.9e-142 508.4 521 51.2
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 5.9e-141 505.4 509 54.0
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 2.2e-140 503.4 541 51.6
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 1.9e-139 500.4 541 53.8
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 2.1e-138 496.9 571 51.7
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 1.1e-136 491.1 517 51.8
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 3.8e-132 476.1 473 54.8
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 5.0e-132 475.7 394 64.5
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 8.5e-132 474.9 345 69.9
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.0e-129 468.0 416 57.2
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.0e-129 468.0 545 47.7
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 1.1e-126 458.0 359 65.7
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 5.5e-115 419.1 433 54.7
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 4.1e-102 376.3 326 61.7
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 5.9e-101 372.5 545 43.3
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 5.0e-100 369.4 474 47.3
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 8.9e-97 358.6 259 73.0
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.3e-95 354.8 377 49.1
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 1.3e-87 328.2 284 56.3
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 6.2e-74 282.7 474 37.8
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 1.6e-69 268.1 486 37.2
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 7.8e-69 265.8 236 61.9
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 3.0e-68 263.8 299 50.5
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 8.7e-60 235.7 479 31.9
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 5.1e-44 183.3 255 44.7
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.8e-34 151.0 120 56.7
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-32 144.8 95 74.7
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 4.5e-32 143.7 245 37.6
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 2.2e-31 141.4 194 36.6
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 9.7e-27 125.9 179 43.6
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.3e-23 115.5 62 83.9
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 3.6e-21 107.5 80 62.5
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 6.5e-15 86.7 80 55.0
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 6.1e-13 80.1 168 41.7


User provided reference genes

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