Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 0.0e+00 1603.6 866 100.0
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.1e-295 1020.0 870 69.1
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 6.5e-277 957.6 869 64.4
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 7.5e-265 917.5 872 63.0
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 1.2e-243 847.0 884 57.2
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 3.1e-242 842.4 884 59.7
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.4e-239 833.6 890 59.2
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 2.8e-235 819.3 907 56.1
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 6.2e-235 818.1 889 56.5
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 5.2e-234 815.1 887 56.6
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.3e-232 810.4 877 57.9
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 6.0e-230 801.6 890 55.7
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 7.8e-230 801.2 923 56.1
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 7.6e-225 784.6 936 52.2
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 7.1e-223 778.1 889 53.8
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 4.6e-222 775.4 889 55.6
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.0e-221 774.2 818 58.8
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 3.0e-221 772.7 837 55.7
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 9.6e-220 767.7 899 53.9
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.4e-218 763.8 889 55.1
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 1.2e-217 760.8 887 54.7
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 9.9e-217 757.7 870 54.8
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.3e-213 747.3 828 55.9
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 2.5e-212 743.0 805 55.8
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 3.7e-211 739.2 901 52.3
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 2.6e-209 733.0 884 53.5
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 5.8e-209 731.9 891 51.5
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 1.6e-206 723.8 874 53.9
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 3.0e-205 719.5 839 53.4
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 5.1e-205 718.8 835 53.8
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 7.4e-204 714.9 884 52.7
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.4e-202 709.9 887 51.3
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 5.3e-202 708.8 882 52.4
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 6.9e-202 708.4 883 51.1
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 1.5e-201 707.2 897 50.8
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 7.6e-201 704.9 885 52.5
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.7e-200 703.7 895 50.6
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.2e-200 703.4 859 50.9
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 3.8e-200 702.6 856 52.6
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.5e-199 699.9 888 51.7
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 4.2e-199 699.1 885 51.6
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 5.5e-199 698.7 858 52.4
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 1.2e-198 697.6 763 57.9
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 1.2e-198 697.6 788 54.2
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 2.7e-198 696.4 856 51.8
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 7.9e-198 694.9 853 51.5
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 1.8e-197 693.7 890 51.5
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 8.7e-197 691.4 906 48.6
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.5e-196 690.6 885 52.0
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.9e-196 690.3 887 51.6
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 2.5e-196 689.9 871 52.7
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 4.3e-196 689.1 883 52.1
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 4.3e-196 689.1 893 50.5
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 9.7e-196 688.0 896 50.6
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 4.1e-194 682.6 851 51.2
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 2.6e-193 679.9 892 50.1
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 1.7e-192 677.2 874 52.9
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 1.6e-190 670.6 894 50.1
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.1e-190 670.2 887 50.7
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 2.7e-190 669.8 892 50.3
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 4.6e-190 669.1 869 50.7
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 7.9e-190 668.3 885 51.0
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 1.0e-189 667.9 795 54.8
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 1.3e-189 667.5 844 52.4
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 8.7e-189 664.8 893 50.3
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 8.7e-189 664.8 900 50.8
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.1e-188 664.5 767 55.9
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.7e-187 659.4 883 50.6
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 1.3e-184 651.0 893 49.8
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.2e-182 644.4 883 47.9
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 1.2e-182 644.4 965 45.3
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 6.1e-182 642.1 872 49.1
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.0e-181 639.8 884 47.7
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 1.5e-180 637.5 805 52.4
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.5e-180 637.5 841 51.1
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 5.7e-180 635.6 897 47.8
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.1e-178 631.3 862 49.7
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 7.7e-177 625.2 874 47.0
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 2.2e-176 623.6 877 49.0
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-175 621.3 884 47.2
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 8.8e-173 611.7 882 47.8
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 2.0e-172 610.5 849 49.5
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 2.6e-172 610.1 775 51.2
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 1.3e-171 607.8 882 46.1
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.7e-171 607.4 765 51.8
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.8e-171 605.9 887 46.8
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 2.4e-170 603.6 776 51.9
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 2.6e-169 600.1 777 49.5
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.1e-167 594.7 871 46.8
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 4.0e-165 586.3 868 45.9
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 5.2e-165 585.9 884 47.7
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 8.8e-165 585.1 884 48.0
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.5e-164 582.0 885 47.6
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 1.2e-161 574.7 720 52.8
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.3e-160 571.2 863 47.0
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 7.2e-159 565.5 612 54.9
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 1.6e-153 547.7 898 44.8
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 2.7e-153 547.0 903 45.1
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 4.5e-153 546.2 783 48.3
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 4.5e-153 546.2 852 44.5
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.3e-152 543.9 876 43.0
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 1.1e-151 541.6 904 44.2
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 4.2e-151 539.7 780 46.4
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 2.8e-150 537.0 892 45.1
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 6.1e-150 535.8 781 46.1
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.4e-149 534.6 883 43.1
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 7.0e-146 522.3 685 49.1
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 5.0e-144 516.2 884 42.4
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 6.1e-142 509.2 667 49.9
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.5e-140 504.6 857 41.2
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 4.9e-139 499.6 765 47.7
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 6.0e-137 492.7 720 50.4
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 1.9e-135 487.6 842 41.1
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 1.2e-132 478.4 760 45.7
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 1.2e-132 478.4 685 46.6
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 3.4e-132 476.9 775 46.7
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 5.8e-132 476.1 747 48.1
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 6.6e-128 462.6 769 46.0
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.1e-127 461.8 749 46.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 3.6e-126 456.8 875 40.9
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 6.2e-126 456.1 872 39.9
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 6.8e-125 452.6 863 39.3
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 6.8e-125 452.6 858 40.7
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 5.4e-122 443.0 861 38.3
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 7.8e-121 439.1 753 45.2
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.5e-119 434.9 660 47.9
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 4.1e-114 416.8 723 43.8
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 6.6e-112 409.5 721 43.3
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.3e-111 407.1 750 44.3
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 2.4e-106 391.0 711 42.2
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 5.4e-106 389.8 719 42.8
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 1.6e-105 388.3 721 42.6
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 2.4e-101 374.4 738 40.7
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.0e-96 359.0 751 39.1
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 3.5e-89 334.0 315 59.0
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 3.5e-89 334.0 315 59.0
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 4.9e-83 313.5 421 47.5
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 2.1e-73 281.6 646 35.9
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 3.0e-72 277.7 503 41.2
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 3.3e-71 274.2 1002 30.3
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 1.4e-69 268.9 801 34.6
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 1.2e-65 255.8 714 33.5
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 4.1e-61 240.7 756 31.0
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 1.4e-58 232.3 378 44.7
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 2.6e-55 221.5 270 49.6
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 3.8e-51 207.6 342 40.4
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 6.5e-51 206.8 662 29.0
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 6.1e-41 173.7 166 53.6
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 4.8e-38 164.1 216 45.8
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 1.4e-37 162.5 423 34.5
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 1.1e-34 152.9 118 74.6
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.6e-33 149.1 122 63.9
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 1.6e-33 149.1 136 59.6
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 1.4e-29 136.0 174 47.1
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 1.7e-27 129.0 105 67.6
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 1.2e-20 106.3 133 47.4
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 2.7e-20 105.1 121 49.6
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.7e-19 102.4 106 50.0
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.5e-18 99.4 117 52.1
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 1.6e-17 95.9 77 64.9
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.2e-14 85.5 136 44.9
BolC2t07935H Brassica oleracea HOM05D003640 ORTHO05D004439 3.2e-13 81.6 311 30.9
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 2.1e-12 79.0 377 28.6
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 1.7e-11 75.9 87 47.1
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 1.7e-11 75.9 87 47.1
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 2.5e-10 72.0 122 44.3
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 1.2e-09 69.7 61 57.4
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 3.6e-09 68.2 34 91.2
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 6.2e-09 67.4 140 35.7
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 2.3e-08 65.5 45 66.7
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 5.2e-08 64.3 39 79.5
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 4.4e-07 61.2 166 35.5
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 5.8e-07 60.8 149 36.2
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 1.7e-06 59.3 194 32.0


User provided reference genes

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