Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8588 Avicennia marina HOM05D000026 ORTHO05D009413 1.5e-92 342.8 174 100.0
SGA_v2.0_scaffold18G08486 Striga asiatica HOM05D000026 ORTHO05D009413 2.4e-45 186.0 175 59.4
Migut.F00132 Erythranthe guttata HOM05D000026 ORTHO05D009413 1.2e-44 183.7 175 57.7
Oeu029329.1 Olea europaea HOM05D000026 ORTHO05D009413 2.0e-44 183.0 173 55.5
Actinidia08711 Actinidia chinensis HOM05D000026 ORTHO05D009413 1.7e-38 163.3 173 52.0
GSVIVG01038671001 Vitis vinifera HOM05D000026 ORTHO05D009413 8.2e-38 161.0 173 49.1
Solyc03g080060.1 Solanum lycopersicum HOM05D000026 ORTHO05D009413 2.4e-37 159.5 173 46.8
Actinidia08710 Actinidia chinensis HOM05D001768 ORTHO05D009413 5.3e-37 158.3 173 51.4
Dinv17285 Davidia involucrata HOM05D002676 ORTHO05D009413 1.2e-36 157.1 173 47.4
CSS0038180 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D009413 2.7e-36 156.0 173 50.9
Peaxi162Scf01026g00023 Petunia axillaris HOM05D000026 ORTHO05D009413 3.5e-36 155.6 174 46.6
SalBow4G0681 Salvia bowleyana HOM05D000026 ORTHO05D009413 5.9e-36 154.8 174 54.0
SalBow4G2059 Salvia bowleyana HOM05D000026 ORTHO05D009413 5.9e-36 154.8 174 54.0
PGSC0003DMG400000578 Solanum tuberosum HOM05D000026 ORTHO05D009413 1.7e-35 153.3 173 46.2
Sopen03g021780 Solanum pennellii HOM05D000026 ORTHO05D009413 2.9e-35 152.5 173 46.8
Sopen03g021790 Solanum pennellii HOM05D000026 ORTHO05D009413 2.9e-35 152.5 173 46.8
RcHm_v2.0_Chr1g0383191 Rosa chinensis HOM05D000026 ORTHO05D009413 3.2e-34 149.1 173 45.1
Hma1.2p1_0115F.1_g055640 Hydrangea macrophylla HOM05D000026 ORTHO05D009413 4.2e-34 148.7 178 47.2
FAN01G1521 Fragaria x ananassa HOM05D000026 ORTHO05D009413 1.2e-33 147.1 173 45.7
FAN10G0785 Fragaria x ananassa HOM05D000026 ORTHO05D009413 1.2e-33 147.1 173 45.7
FAN10G1249 Fragaria x ananassa HOM05D000026 ORTHO05D009413 1.2e-33 147.1 173 45.7
CiPaw.05G207900 Carya illinoinensis HOM05D000026 ORTHO05D009413 3.6e-33 145.6 173 44.5
QL09p006160 Quercus lobata HOM05D000026 ORTHO05D009413 3.6e-33 145.6 174 44.8
Haze_00321 Corylus avellana HOM05D000026 ORTHO05D009413 6.8e-32 141.4 173 45.1
ECA233G6076 Erigeron canadensis HOM05D000026 ORTHO05D009413 1.5e-31 140.2 173 45.7
Lalb_Chr10g0103041 Lupinus albus HOM05D000026 ORTHO05D009413 5.7e-31 138.3 183 42.1
Cfa016140 Carpinus fangiana HOM05D000026 ORTHO05D009413 1.3e-30 137.1 173 43.4
Nitab4.5_0000021g0120 Nicotiana tabacum HOM05D000026 ORTHO05D009413 1.3e-30 137.1 173 43.9
Lsat_1_v5_gn_8_24200 Lactuca sativa HOM05D000026 ORTHO05D009413 2.2e-30 136.3 177 45.2
EL10Ac3g05144 Beta vulgaris HOM05D000026 ORTHO05D009413 4.8e-30 135.2 179 44.1
Atru.chr12.2534 Acer truncatum HOM05D000026 ORTHO05D009413 8.3e-30 134.4 180 43.3
CAN.G303.46 Capsicum annuum HOM05D000026 ORTHO05D009413 8.3e-30 134.4 173 42.2
Nitab4.5_0004582g0040 Nicotiana tabacum HOM05D000026 ORTHO05D009413 8.3e-30 134.4 173 43.4
Atru.chr4.810 Acer truncatum HOM05D000026 ORTHO05D009413 1.1e-29 134.0 180 42.8
Glyma.02G221900 Glycine max HOM05D000026 ORTHO05D009413 1.4e-29 133.7 181 41.4
Medtr5g068770 Medicago truncatula HOM05D000026 ORTHO05D009413 1.8e-29 133.3 179 39.7
LjContig00155g0017282 Lotus japonicus HOM05D000026 ORTHO05D009413 2.4e-29 132.9 181 40.9
Hund09732 Selenicereus undatus HOM05D000026 ORTHO05D009413 3.1e-29 132.5 179 44.7
Eucgr.A00972 Eucalyptus grandis HOM05D000026 ORTHO05D009413 5.4e-29 131.7 173 42.2
MD01G1230400 Malus domestica HOM05D000026 ORTHO05D009413 9.1e-29 131.0 173 42.2
PGR042G2082 Punica granatum HOM05D000026 ORTHO05D009413 9.1e-29 131.0 176 44.9
Thecc.03G211200 Theobroma cacao HOM05D000026 ORTHO05D009413 9.1e-29 131.0 178 41.0
VMungo0647G0956 Vigna mungo HOM05D000026 ORTHO05D009413 9.1e-29 131.0 180 41.1
vmacro06466 Vaccinium macrocarpon HOM05D000026 ORTHO05D009413 1.2e-28 130.6 173 42.8
Phvul.008G188700 Phaseolus vulgaris HOM05D000026 ORTHO05D009413 1.6e-28 130.2 184 40.8
Prupe.2G321100 Prunus persica HOM05D000026 ORTHO05D009413 1.6e-28 130.2 173 41.6
Sabra15G0003100 Salix brachista HOM05D000026 ORTHO05D009413 1.6e-28 130.2 179 38.5
TPR.G20768 Trifolium pratense HOM05D000026 ORTHO05D009413 1.6e-28 130.2 183 42.1
Potri.015G004500 Populus trichocarpa HOM05D000026 ORTHO05D009413 2.0e-28 129.8 179 38.0
TPR.G5838 Trifolium pratense HOM05D000026 ORTHO05D009413 2.0e-28 129.8 173 43.4
Glyma.14G189100 Glycine max HOM05D000026 ORTHO05D009413 2.7e-28 129.4 180 40.0
Gohir.A05G415401 Gossypium hirsutum HOM05D000026 ORTHO05D009413 3.5e-28 129.0 180 41.1
Gohir.D04G000801 Gossypium hirsutum HOM05D000026 ORTHO05D009413 3.5e-28 129.0 180 41.1
Gorai.012G001800 Gossypium raimondii HOM05D000026 ORTHO05D009413 3.5e-28 129.0 180 41.1
Ca_05535_v3 Cicer arietinum L. HOM05D000026 ORTHO05D009413 4.5e-28 128.6 179 40.2
FAN03G3295 Fragaria x ananassa HOM05D000026 ORTHO05D009413 7.7e-28 127.9 173 42.2
arahy.Tifrunner.gnm1.ann1.XEI4AF Arachis hypogaea HOM05D000026 ORTHO05D009413 1.0e-27 127.5 175 40.0
RcHm_v2.0_Chr1g0334661 Rosa chinensis HOM05D000026 ORTHO05D009413 1.0e-27 127.5 155 43.9
Psat2g061480 Pisum sativum HOM05D000026 ORTHO05D009413 1.7e-27 126.7 179 40.2
ATR0030G020 Amborella trichopoda HOM05D000026 ORTHO05D009413 2.9e-27 125.9 173 43.4
Lalb_Chr04g0252521 Lupinus albus HOM05D000026 ORTHO05D009413 3.8e-27 125.6 181 43.6
HanXRQChr08g0217271 Helianthus annuus HOM05D000026 ORTHO05D009413 8.6e-27 124.4 173 40.5
COL.COLO4_14390 Corchorus olitorius HOM05D000026 ORTHO05D009413 1.5e-26 123.6 182 39.0
Duzib205G1149 Durio zibethinus HOM05D000026 ORTHO05D009413 1.5e-26 123.6 178 41.6
CANSAT21G0106 Cannabis sativa HOM05D000026 ORTHO05D009413 5.5e-26 121.7 175 41.7
FvH4_7g33120 Fragaria vesca HOM05D000026 ORTHO05D009413 5.5e-26 121.7 173 41.0
Cpa.g.sc3.175 Carica papaya HOM05D000026 ORTHO05D009413 7.2e-26 121.3 182 42.9
Rhsim03G0217500 Rhododendron simsii HOM05D000026 ORTHO05D009413 9.5e-26 120.9 174 42.0
AUR62028107 Chenopodium quinoa HOM05D000026 ORTHO05D009413 1.6e-25 120.2 182 42.3
AUR62005959 Chenopodium quinoa HOM05D000026 ORTHO05D009413 4.7e-25 118.6 182 41.8
Manes.01G044900 Manihot esculenta HOM05D000026 ORTHO05D009413 1.4e-24 117.1 174 40.2
arahy.Tifrunner.gnm1.ann1.U03MUX Arachis hypogaea HOM05D000026 ORTHO05D009413 5.2e-24 115.2 175 37.7
Nn3g18751 Nelumbo nucifera HOM05D000026 ORTHO05D009413 4.4e-23 112.1 173 37.0
Hma1.2p1_0138F.1_g062710 Hydrangea macrophylla HOM05D000026 ORTHO05D009413 7.5e-23 111.3 175 39.4
RcHm_v2.0_Chr7g0199741 Rosa chinensis HOM05D000026 ORTHO05D009413 1.6e-20 103.6 167 37.1
SEGI_05663 Sequoiadendron giganteum HOM05D000026 ORTHO05D009413 2.0e-20 103.2 176 36.9
SEGI_25931 Sequoiadendron giganteum HOM05D000026 ORTHO05D009413 2.0e-20 103.2 176 36.9
Ciclev10024559m.g Citrus clementina HOM05D000026 ORTHO05D009413 2.9e-19 99.4 174 37.4
CiPaw.11G142400 Carya illinoinensis HOM05D000026 ORTHO05D009413 4.3e-18 95.5 173 32.4
COL.COLO4_23791 Corchorus olitorius HOM05D000026 ORTHO05D009413 4.3e-18 95.5 165 37.6
Ah.07g204290 Amaranthus hybridus HOM05D000026 ORTHO05D009413 6.1e-17 91.7 179 35.8
Prupe.5G088200 Prunus persica HOM05D000026 ORTHO05D009413 4.0e-16 89.0 174 36.2
Eucgr.E00520 Eucalyptus grandis HOM05D000026 ORTHO05D009413 5.8e-15 85.1 159 37.1
TPR.G26679 Trifolium pratense HOM05D000026 ORTHO05D009413 9.8e-15 84.3 135 39.3
Cfa012082 Carpinus fangiana HOM05D000026 ORTHO05D009413 4.1e-13 79.0 137 32.8
Oeu055415.1 Olea europaea HOM05D000026 ORTHO05D009413 1.9e-10 70.1 79 46.8
Haze_08976 Corylus avellana HOM05D000026 ORTHO05D009413 1.6e-09 67.0 123 33.3
COL.COLO4_15706 Corchorus olitorius HOM05D000026 ORTHO05D009413 4.7e-09 65.5 68 48.5
Dinv39028 Davidia involucrata HOM05D000026 ORTHO05D009413 1.4e-08 63.9 156 32.7
Atru.chr9.1509 Acer truncatum HOM05D000026 ORTHO05D009413 7.5e-07 58.2 64 45.3
QL02p103208 Quercus lobata HOM05D000026 ORTHO05D000094 1.7e-06 57.0 158 32.3
MD10G1020300 Malus domestica HOM05D000026 ORTHO05D001292 2.9e-06 56.2 172 29.1
Sed0001055 Sechium edule HOM05D000026 ORTHO05D001292 8.3e-06 54.7 163 31.3


User provided reference genes

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