Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 4.1e-145 518.1 267 100.0
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 3.5e-88 328.9 235 74.0
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.7e-79 300.1 237 67.1
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 1.3e-71 273.9 239 61.5
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.3e-71 273.9 247 63.2
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 6.0e-64 248.4 241 58.5
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 1.3e-63 247.3 229 59.0
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 1.3e-61 240.7 229 58.1
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.4e-60 237.3 238 58.4
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.0e-60 235.7 201 62.2
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 9.0e-60 234.6 241 53.9
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 7.6e-59 231.5 238 54.2
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 1.0e-58 231.1 242 55.0
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 1.3e-58 230.7 240 56.2
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.3e-58 230.7 224 57.6
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.7e-58 230.3 239 55.6
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 1.7e-58 230.3 166 72.9
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 2.2e-58 229.9 228 57.0
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 4.9e-58 228.8 238 55.9
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 4.9e-58 228.8 232 57.3
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 8.4e-58 228.0 241 55.2
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.1e-57 227.6 233 56.2
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.1e-57 227.6 228 57.0
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.1e-57 227.6 228 57.0
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.9e-57 226.9 203 60.6
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.5e-57 226.5 228 56.6
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 2.5e-57 226.5 197 64.5
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 7.1e-57 224.9 242 52.9
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 2.1e-56 223.4 236 52.1
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 3.5e-56 222.6 232 54.7
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 6.0e-56 221.9 225 58.2
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-55 221.1 236 55.1
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.0e-55 221.1 236 55.1
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.3e-55 219.9 231 52.4
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 5.1e-55 218.8 241 54.8
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 6.7e-55 218.4 226 56.2
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 8.7e-55 218.0 186 62.9
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 1.1e-54 217.6 201 60.7
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.9e-54 216.9 202 59.9
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 5.7e-54 215.3 186 62.4
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 7.4e-54 214.9 272 50.0
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 1.3e-53 214.2 238 55.9
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 1.6e-53 213.8 218 55.0
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.6e-53 213.8 230 56.1
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 2.8e-53 213.0 186 61.8
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 2.8e-53 213.0 216 57.4
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 2.8e-53 213.0 186 61.8
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.8e-53 213.0 245 51.0
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 3.7e-53 212.6 239 54.0
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 3.7e-53 212.6 233 57.1
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 8.2e-53 211.5 187 62.0
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 8.2e-53 211.5 251 51.4
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.8e-52 210.3 233 56.7
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 1.8e-52 210.3 200 59.0
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 6.9e-52 208.4 234 53.8
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 9.0e-52 208.0 252 48.8
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 3.4e-51 206.1 182 62.6
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 4.5e-51 205.7 242 49.2
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 7.6e-51 204.9 213 57.7
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 7.6e-51 204.9 238 52.9
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 2.2e-50 203.4 219 55.7
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 3.8e-50 202.6 224 53.1
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 5.0e-50 202.2 213 55.9
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 5.0e-50 202.2 202 57.4
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 8.4e-50 201.4 201 58.2
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.2e-49 199.5 201 57.7
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 4.2e-49 199.1 254 52.0
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 9.3e-49 198.0 230 53.5
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.2e-48 197.6 250 50.8
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 1.6e-48 197.2 247 51.8
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 2.7e-48 196.4 205 55.6
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 2.3e-47 193.4 283 46.3
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 3.0e-47 193.0 286 44.4
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 2.5e-46 189.9 178 61.8
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 2.5e-46 189.9 226 51.3
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 3.3e-46 189.5 222 54.1
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 3.3e-46 189.5 272 46.0
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 4.3e-46 189.1 283 43.1
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 7.4e-46 188.3 235 51.1
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 9.7e-46 188.0 221 51.6
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 2.8e-45 186.4 215 51.2
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 3.7e-45 186.0 175 60.0
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 4.8e-45 185.7 172 59.9
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 6.9e-44 181.8 227 49.3
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 1.2e-43 181.0 230 49.6
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.5e-43 180.6 229 48.0
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 5.9e-43 178.7 246 45.9
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 1.7e-42 177.2 201 52.2
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 1.1e-38 164.5 202 50.5
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 2.0e-38 163.7 228 47.4
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 2.5e-38 163.3 145 58.6
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 3.7e-37 159.5 122 64.8
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 6.3e-37 158.7 236 44.9
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.4e-36 157.5 116 66.4
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 2.2e-34 150.2 277 39.7
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.9e-34 149.8 172 53.5
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 7.9e-32 141.7 149 52.3
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 6.7e-31 138.7 248 37.9
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 3.3e-30 136.3 211 44.5
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 5.7e-30 135.6 204 45.1
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 7.0e-28 128.6 172 47.7
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 5.0e-26 122.5 105 60.0
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 1.4e-23 114.4 188 43.6
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 7.5e-22 108.6 205 39.5
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 2.2e-21 107.1 161 42.2
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 3.7e-21 106.3 126 46.0
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 8.5e-18 95.1 197 35.5
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 8.0e-16 88.6 140 45.7
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 6.8e-15 85.5 130 48.5
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 2.6e-14 83.6 115 50.4
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 1.3e-13 81.3 50 74.0
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 2.8e-13 80.1 100 54.0
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 3.7e-13 79.7 126 39.7
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 7.0e-12 75.5 71 54.9
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.7e-10 70.9 51 66.7
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 2.2e-10 70.5 49 75.5
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 3.8e-10 69.7 91 48.4
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 6.5e-10 68.9 88 50.0
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 3.2e-09 66.6 128 35.9
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 8.8e-07 58.5 83 43.4


User provided reference genes

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