Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 2.9e-94 348.6 180 100.0
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.1e-50 203.8 161 70.8
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 2.7e-44 182.6 166 63.3
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 3.7e-41 172.2 164 64.0
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 2.9e-38 162.5 166 56.0
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 7.2e-37 157.9 111 73.0
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.6e-36 156.8 169 55.0
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.8e-35 153.3 96 79.2
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 3.0e-35 152.5 175 54.9
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 6.8e-35 151.4 164 54.9
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.2e-34 150.6 164 54.9
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 1.2e-34 150.6 157 57.3
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 1.5e-34 150.2 103 75.7
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 3.4e-34 149.1 166 56.6
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 4.4e-34 148.7 174 52.3
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 4.4e-34 148.7 163 55.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 9.8e-34 147.5 167 56.9
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.2e-33 146.4 98 75.5
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 2.8e-33 146.0 102 74.5
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 2.8e-33 146.0 129 60.5
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 2.8e-33 146.0 124 67.7
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 2.8e-33 146.0 100 76.0
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 2.8e-33 146.0 100 76.0
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 2.8e-33 146.0 148 53.4
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 3.7e-33 145.6 167 53.3
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 6.3e-33 144.8 162 53.1
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 6.3e-33 144.8 88 80.7
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 6.3e-33 144.8 96 77.1
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 8.3e-33 144.4 162 54.9
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 1.1e-32 144.1 173 52.6
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 1.4e-32 143.7 165 55.2
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.4e-32 143.7 104 70.2
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 4.1e-32 142.1 88 80.7
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 4.1e-32 142.1 102 73.5
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 7.0e-32 141.4 103 69.9
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 9.1e-32 141.0 103 71.8
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 1.6e-31 140.2 93 73.1
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 3.5e-31 139.0 156 52.6
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 7.7e-31 137.9 105 68.6
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 7.7e-31 137.9 162 50.6
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 1.0e-30 137.5 88 77.3
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 1.0e-30 137.5 94 74.5
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.7e-30 136.7 88 75.0
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 3.8e-30 135.6 94 77.7
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 3.8e-30 135.6 104 68.3
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 3.8e-30 135.6 96 69.8
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 3.8e-30 135.6 159 53.5
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 3.8e-30 135.6 87 78.2
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 5.0e-30 135.2 151 53.0
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 5.0e-30 135.2 85 78.8
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 5.0e-30 135.2 112 63.4
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 5.0e-30 135.2 104 68.3
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 6.5e-30 134.8 166 50.0
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 6.5e-30 134.8 88 73.9
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 8.6e-30 134.4 91 73.6
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 8.6e-30 134.4 106 67.0
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 8.6e-30 134.4 94 71.3
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 8.6e-30 134.4 91 74.7
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 1.5e-29 133.7 88 75.0
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.5e-29 133.7 91 73.6
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.5e-29 133.7 96 70.8
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 2.5e-29 132.9 94 71.3
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.5e-29 132.9 88 75.0
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 2.5e-29 132.9 88 75.0
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 2.5e-29 132.9 91 73.6
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 2.5e-29 132.9 91 75.8
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 3.2e-29 132.5 167 49.7
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 3.2e-29 132.5 158 51.3
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 4.2e-29 132.1 88 75.0
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 5.5e-29 131.7 171 50.3
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 7.2e-29 131.3 163 49.7
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 9.5e-29 131.0 89 74.2
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 2.1e-28 129.8 162 51.9
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 2.1e-28 129.8 171 50.3
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 3.6e-28 129.0 171 49.7
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 3.6e-28 129.0 86 75.6
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 4.7e-28 128.6 171 49.7
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 4.7e-28 128.6 151 50.3
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 4.7e-28 128.6 94 72.3
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 6.1e-28 128.3 81 80.2
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 8.0e-28 127.9 175 47.4
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 8.0e-28 127.9 86 75.6
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 1.0e-27 127.5 86 74.4
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 1.8e-27 126.7 86 74.4
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 1.8e-27 126.7 86 74.4
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.8e-27 126.7 86 74.4
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 4.0e-27 125.6 86 74.4
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 5.2e-27 125.2 100 64.0
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.5e-26 123.6 96 66.7
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 3.4e-26 122.5 75 81.3
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 9.8e-26 120.9 88 71.6
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 9.8e-26 120.9 84 75.0
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 2.2e-25 119.8 81 72.8
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 3.7e-25 119.0 86 68.6
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 4.9e-25 118.6 85 68.2
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.1e-24 117.5 94 68.1
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.4e-24 115.2 89 67.4
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.2e-23 114.0 134 50.0
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 6.6e-22 108.2 144 47.9
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 2.1e-20 103.2 172 44.8
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 8.0e-20 101.3 80 63.8
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 1.2e-18 97.4 81 55.6
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 2.6e-18 96.3 107 51.4
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 5.7e-18 95.1 101 45.5
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 3.9e-14 82.4 51 80.4
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 3.9e-14 82.4 51 80.4
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 5.0e-14 82.0 49 83.7
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 6.6e-14 81.6 46 84.8
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 1.1e-13 80.9 90 52.2
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.8e-10 68.6 48 66.7
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.7e-06 57.0 63 54.0
Oeu019053.1 Olea europaea HOM05D002854 ORTHO05D003051 5.0e-06 55.5 100 35.0
Pp3c5_25080 Physcomitrium patens HOM05D002854 ORTHO05D003051 6.6e-06 55.1 160 31.9
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 8.6e-06 54.7 39 69.2


User provided reference genes

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