Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 4.1e-262 907.5 463 100.0
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 8.0e-173 610.9 462 67.7
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.4e-172 610.1 453 68.7
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 1.4e-169 600.1 456 66.4
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 4.4e-163 578.6 460 66.1
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 7.1e-153 544.7 458 61.1
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 9.9e-147 524.2 458 59.8
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 4.9e-146 521.9 458 59.6
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 4.7e-141 505.4 456 57.0
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 2.2e-138 496.5 457 58.0
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 2.4e-137 493.0 456 55.0
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 9.3e-137 491.1 456 56.4
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 1.2e-136 490.7 456 55.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 2.1e-136 490.0 464 55.0
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 2.5e-134 483.0 457 54.5
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 6.2e-133 478.4 457 55.4
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 2.7e-128 463.0 431 55.5
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 6.6e-127 458.4 457 53.0
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 3.3e-126 456.1 475 49.7
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 7.4e-126 454.9 463 51.0
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 1.8e-124 450.3 466 50.6
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 3.1e-124 449.5 412 58.3
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 4.0e-124 449.1 414 58.0
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 9.9e-123 444.5 401 59.1
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 2.2e-122 443.4 463 49.2
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 3.8e-122 442.6 475 49.7
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 2.7e-120 436.4 477 48.8
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 2.7e-120 436.4 462 49.6
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 7.9e-120 434.9 464 49.1
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.3e-119 433.3 470 49.4
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 8.7e-119 431.4 476 48.3
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 4.3e-118 429.1 475 47.6
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.3e-116 422.2 466 48.3
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 6.9e-116 421.8 470 48.9
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 9.0e-116 421.4 461 47.9
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 2.0e-115 420.2 463 49.2
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 5.8e-115 418.7 464 48.3
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 2.2e-114 416.8 475 47.8
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 6.5e-114 415.2 468 48.1
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 1.4e-113 414.1 471 48.2
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 2.5e-113 413.3 471 49.5
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 4.2e-113 412.5 466 47.6
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 5.5e-113 412.1 470 49.8
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 1.2e-112 411.0 475 46.1
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 1.2e-112 411.0 473 47.6
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 2.1e-112 410.2 475 46.7
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 2.1e-112 410.2 465 47.5
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 2.1e-112 410.2 463 47.7
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 2.1e-112 410.2 470 47.4
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 2.3e-111 406.8 466 47.0
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 3.0e-111 406.4 471 45.2
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 8.7e-111 404.8 474 48.7
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 1.6e-109 400.6 476 46.6
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.7e-109 399.4 475 46.9
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 1.4e-108 397.5 464 46.6
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 1.4e-108 397.5 490 45.3
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 2.4e-108 396.7 474 44.7
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 6.9e-108 395.2 464 46.6
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 9.0e-108 394.8 466 46.1
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.2e-107 394.4 475 46.5
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.5e-107 394.0 471 48.0
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 4.5e-107 392.5 464 46.6
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.9e-107 392.1 473 45.5
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 1.7e-106 390.6 477 44.4
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.9e-105 387.1 464 45.9
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.2e-105 386.0 461 46.6
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 1.2e-104 384.4 455 47.0
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 1.2e-104 384.4 455 47.0
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 1.2e-104 384.4 455 47.0
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 2.1e-104 383.6 423 47.0
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 6.1e-104 382.1 452 46.7
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.0e-103 381.3 452 46.2
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 2.3e-103 380.2 383 51.7
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.0e-103 379.8 460 46.5
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 3.9e-103 379.4 447 47.2
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.3e-101 374.4 451 44.1
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.1e-100 371.3 447 46.5
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.1e-100 369.8 439 46.7
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 3.4e-99 366.3 418 47.1
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 4.5e-99 365.9 399 47.4
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.0e-98 364.8 409 47.2
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 6.1e-96 355.5 454 44.1
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 6.9e-92 342.0 397 47.9
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 7.7e-91 338.6 470 42.8
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 6.7e-87 325.5 369 46.6
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.2e-83 314.7 598 34.6
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 5.9e-75 285.8 264 54.2
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.5e-73 281.2 381 43.3
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.4e-71 274.6 238 55.0
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.3e-69 268.1 330 45.5
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 5.5e-65 252.7 337 44.2
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 4.0e-63 246.5 464 36.2
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 3.7e-61 240.0 238 51.3
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 1.7e-58 231.1 523 32.1
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 2.0e-54 217.6 255 45.1
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 3.2e-52 210.3 288 43.8
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.0e-46 191.0 459 31.8
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.7e-45 188.0 468 28.8
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 2.7e-43 180.6 453 33.8
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.1e-41 175.3 140 60.0
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 9.8e-38 162.2 151 58.9
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 4.6e-35 153.3 205 44.4
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 7.8e-35 152.5 503 26.4
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 1.9e-33 147.9 459 29.4
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 2.6e-30 137.5 131 57.3
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 5.8e-30 136.3 246 37.0
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 4.9e-29 133.3 248 37.5
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 3.2e-28 130.6 122 54.9
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 4.9e-21 106.7 120 45.8
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 1.3e-18 98.6 97 54.6
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.7e-13 81.6 101 41.6
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 8.4e-13 79.3 122 36.1
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 1.9e-12 78.2 108 47.2
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 5.4e-12 76.6 177 31.6
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.0e-10 72.4 131 33.6


User provided reference genes

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