Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 9.7e-63 243.4 134 100.0
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 2.1e-17 92.8 145 46.2
Oeu022504.1 Olea europaea HOM05D008269 ORTHO05D010153 1.3e-14 83.6 131 42.7
Oeu021725.1 Olea europaea HOM05D012743 ORTHO05D010153 3.7e-14 82.0 166 40.4
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 1.1e-13 80.5 143 38.5
Nitab4.5_0002786g0070 Nicotiana tabacum HOM05D012743 ORTHO05D010153 4.1e-13 78.6 137 39.4
Oeu042584.1 Olea europaea HOM05D000236 ORTHO05D000192 1.6e-12 76.6 138 47.8
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 1.9e-10 69.7 136 43.4
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 1.9e-10 69.7 161 32.3
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 2.5e-10 69.3 127 40.9
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.5e-10 69.3 134 35.8
Lsat_1_v5_gn_8_8201 Lactuca sativa HOM05D055346 ORTHO05D010153 3.3e-10 68.9 145 33.1
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 5.6e-10 68.2 135 35.6
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 7.3e-10 67.8 138 42.8
SalBow2G2015 Salvia bowleyana HOM05D008269 ORTHO05D010153 7.3e-10 67.8 135 40.7
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 2.1e-09 66.2 137 38.0
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 2.8e-09 65.9 139 34.5
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 2.8e-09 65.9 133 35.3
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 3.6e-09 65.5 146 34.9
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 1.1e-08 63.9 134 35.1
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 1.1e-08 63.9 141 40.4
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 1.1e-08 63.9 126 34.9
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 1.4e-08 63.5 146 41.8
SalBow4G0749 Salvia bowleyana HOM05D008269 ORTHO05D010153 1.4e-08 63.5 129 46.5
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 3.1e-08 62.4 136 30.1
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 4.0e-08 62.0 155 33.5
Nitab4.5_0002786g0040 Nicotiana tabacum HOM05D012743 ORTHO05D017764 5.2e-08 61.6 224 30.4
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 1.2e-07 60.5 147 40.1
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 1.5e-07 60.1 143 39.9
Aqoxy7G00619 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 1.5e-07 60.1 143 32.2
DCAR_018124 Daucus carota HOM05D008269 ORTHO05D010153 1.5e-07 60.1 134 34.3
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 2.0e-07 59.7 144 32.6
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 2.6e-07 59.3 126 32.5
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 2.6e-07 59.3 133 35.3
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 3.4e-07 58.9 139 41.0
Nitab4.5_0000023g0730 Nicotiana tabacum HOM05D012743 ORTHO05D010153 3.4e-07 58.9 43 69.8
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 3.4e-07 58.9 144 32.6
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 4.4e-07 58.5 133 31.6
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 4.4e-07 58.5 143 33.6
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 4.4e-07 58.5 139 30.2
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 5.8e-07 58.2 143 32.2
Aqoxy7G00618 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 7.6e-07 57.8 144 29.9
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 7.6e-07 57.8 143 41.3
Carub.0006s0609 Capsella rubella HOM05D023982 ORTHO05D010153 1.7e-06 56.6 161 36.6
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 2.2e-06 56.2 137 29.9
Aqoxy7G00620 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 6.4e-06 54.7 129 33.3
Nitab4.5_0000023g0690 Nicotiana tabacum HOM05D012743 ORTHO05D017764 6.4e-06 54.7 114 36.8


User provided reference genes

Program Settings