Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 3.8e-54 214.5 106 100.0
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 3.2e-16 88.6 123 48.8
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 9.2e-16 87.0 114 49.1
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 6.0e-15 84.3 119 47.1
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 7.8e-15 84.0 111 47.7
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 7.8e-15 84.0 113 49.6
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 1.5e-13 79.7 112 47.3
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 5.6e-13 77.8 103 47.6
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 5.6e-13 77.8 107 46.7
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 1.6e-12 76.3 108 47.2
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 2.8e-12 75.5 115 42.6
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 4.7e-12 74.7 113 45.1
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 5.2e-11 71.2 122 44.3
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.5e-10 69.7 112 44.6
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 2.0e-10 69.3 67 55.2
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 3.4e-10 68.6 110 41.8
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 5.8e-10 67.8 111 45.0
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 7.6e-10 67.4 107 42.1
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 9.9e-10 67.0 119 40.3
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 9.9e-10 67.0 117 42.7
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 9.9e-10 67.0 117 42.7
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.3e-09 66.6 69 50.7
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 1.3e-09 66.6 117 41.9
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 1.3e-09 66.6 120 41.7
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 1.7e-09 66.2 100 42.0
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 1.7e-09 66.2 114 45.6
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 2.2e-09 65.9 110 41.8
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 2.2e-09 65.9 107 43.9
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 3.8e-09 65.1 113 37.2
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 3.8e-09 65.1 119 39.5
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 4.9e-09 64.7 80 45.0
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.9e-09 64.7 111 39.6
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 6.4e-09 64.3 120 37.5
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 6.4e-09 64.3 83 50.6
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 2.4e-08 62.4 113 38.1
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 3.2e-08 62.0 111 38.7
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 5.4e-08 61.2 121 38.0
SGA_v2.0_scaffold14G06855 Striga asiatica HOM05D007913 ORTHO05D009599 7.1e-08 60.8 109 40.4
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 9.2e-08 60.5 115 40.9
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.2e-07 60.1 118 39.8
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 6.0e-07 57.8 123 39.8
CANSAT01G0283 Cannabis sativa HOM05D007913 ORTHO05D009599 1.0e-06 57.0 119 38.7
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 1.3e-06 56.6 107 43.9
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 1.7e-06 56.2 107 43.9
Manes.14G101600 Manihot esculenta HOM05D007913 ORTHO05D009599 3.0e-06 55.5 93 43.0
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 5.1e-06 54.7 135 30.4
MD13G1042800 Malus domestica HOM05D007913 ORTHO05D009599 6.6e-06 54.3 113 36.3


User provided reference genes

Program Settings