Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 4.7e-67 257.7 127 100.0
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 9.3e-47 190.3 120 78.3
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.4e-42 176.4 109 79.8
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 2.4e-42 175.6 109 78.9
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.7e-40 169.5 109 75.2
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.7e-40 169.5 109 75.2
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.9e-40 167.9 109 74.3
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.9e-40 167.9 109 74.3
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 3.2e-39 165.2 110 73.6
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.1e-36 156.8 102 76.5
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 2.8e-35 152.1 100 76.0
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 6.9e-34 147.5 105 74.3
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 9.0e-34 147.1 104 72.1
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 9.0e-34 147.1 115 68.7
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 1.5e-33 146.4 105 71.4
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 1.5e-33 146.4 110 69.1
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 2.6e-33 145.6 104 72.1
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 3.4e-33 145.2 108 66.7
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 3.4e-33 145.2 104 70.2
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 3.4e-33 145.2 101 71.3
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 3.4e-33 145.2 101 72.3
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 4.5e-33 144.8 102 70.6
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 5.8e-33 144.4 101 70.3
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 5.8e-33 144.4 101 72.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 5.8e-33 144.4 101 72.3
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.7e-32 142.9 101 72.3
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 1.7e-32 142.9 101 72.3
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.7e-32 142.9 103 69.9
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 2.9e-32 142.1 102 69.6
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 2.9e-32 142.1 101 72.3
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 2.9e-32 142.1 115 63.5
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 4.9e-32 141.4 100 72.0
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 4.9e-32 141.4 101 70.3
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 6.4e-32 141.0 98 72.4
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 6.4e-32 141.0 104 72.1
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 6.4e-32 141.0 102 69.6
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 6.4e-32 141.0 102 69.6
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 8.4e-32 140.6 107 66.4
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.1e-31 140.2 110 64.5
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 1.4e-31 139.8 104 68.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.4e-31 139.8 101 69.3
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 1.4e-31 139.8 102 67.6
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.9e-31 139.4 99 69.7
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 1.9e-31 139.4 104 69.2
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 2.4e-31 139.0 107 64.5
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 3.2e-31 138.7 108 67.6
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.2e-31 138.7 104 71.2
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 4.2e-31 138.3 97 68.0
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 4.2e-31 138.3 97 69.1
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 4.2e-31 138.3 101 66.3
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 4.2e-31 138.3 104 70.2
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 4.2e-31 138.3 104 69.2
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 7.1e-31 137.5 100 67.0
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 7.1e-31 137.5 100 67.0
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 7.1e-31 137.5 102 66.7
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 9.3e-31 137.1 100 67.0
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 9.3e-31 137.1 107 66.4
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 9.3e-31 137.1 101 69.3
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 9.3e-31 137.1 100 71.0
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 9.3e-31 137.1 100 71.0
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 9.3e-31 137.1 115 64.3
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.2e-30 136.7 107 63.6
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.2e-30 136.7 97 68.0
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.2e-30 136.7 104 67.3
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.2e-30 136.7 116 62.1
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.6e-30 136.3 105 63.8
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 1.6e-30 136.3 101 68.3
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 2.1e-30 136.0 97 68.0
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 2.1e-30 136.0 97 68.0
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 2.1e-30 136.0 97 68.0
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 2.1e-30 136.0 101 66.3
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 2.1e-30 136.0 103 68.0
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 2.7e-30 135.6 99 68.7
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 3.5e-30 135.2 99 67.7
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 3.5e-30 135.2 113 65.5
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 4.6e-30 134.8 99 70.7
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 4.6e-30 134.8 101 66.3
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 6.0e-30 134.4 101 70.3
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 6.0e-30 134.4 101 66.3
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 7.9e-30 134.0 107 67.3
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 7.9e-30 134.0 99 67.7
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 7.9e-30 134.0 104 68.3
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 1.0e-29 133.7 99 68.7
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.0e-29 133.7 100 70.0
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 1.0e-29 133.7 104 65.4
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.3e-29 133.3 99 67.7
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.3e-29 133.3 119 61.3
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 1.3e-29 133.3 99 65.7
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.8e-29 132.9 99 66.7
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.8e-29 132.9 101 69.3
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 3.0e-29 132.1 125 57.6
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 3.0e-29 132.1 101 67.3
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 3.9e-29 131.7 99 70.7
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 5.1e-29 131.3 99 66.7
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 6.7e-29 131.0 105 61.9
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 8.7e-29 130.6 100 63.0
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 8.7e-29 130.6 98 67.3
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 8.7e-29 130.6 143 51.7
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 8.7e-29 130.6 101 66.3
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 8.7e-29 130.6 99 70.7
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 1.1e-28 130.2 99 65.7
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.5e-28 129.8 100 66.0
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.5e-28 129.8 101 65.3
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.5e-28 129.0 98 66.3
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 5.6e-28 127.9 100 67.0
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 7.4e-28 127.5 102 66.7
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 9.6e-28 127.1 101 63.4
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 2.1e-27 125.9 107 64.5
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 2.1e-27 125.9 107 64.5
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 2.1e-27 125.9 102 63.7
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.1e-27 125.9 95 68.4
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 6.2e-27 124.4 95 67.4
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 1.1e-26 123.6 97 63.9
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 3.1e-26 122.1 99 61.6
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 6.9e-26 120.9 100 65.0
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 2.0e-25 119.4 97 61.9
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 7.6e-25 117.5 99 61.6
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 2.2e-24 115.9 102 60.8
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 2.5e-23 112.5 75 72.0
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 5.5e-23 111.3 102 59.8
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 2.2e-19 99.4 81 61.7
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 3.7e-19 98.6 57 80.7
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 3.1e-18 95.5 58 79.3
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 3.4e-17 92.0 97 51.5
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.1e-15 87.0 100 46.0
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 3.6e-14 82.0 102 41.2
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 1.1e-12 77.0 100 42.0
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.5e-12 76.6 69 55.1
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 3.7e-11 72.0 64 59.4
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 6.3e-11 71.2 71 50.7
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 1.4e-10 70.1 64 53.1
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 4.5e-09 65.1 79 48.1
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 2.2e-08 62.8 66 51.5
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 5.0e-08 61.6 104 45.2


User provided reference genes

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