Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8155 Avicennia marina HOM05D003587 ORTHO05D004139 3.5e-58 228.0 112 100.0
GSVIVG01016284001 Vitis vinifera HOM05D003587 ORTHO05D004139 9.1e-38 160.2 103 70.9
CSS0029358 Camellia sinensis var. sinensis HOM05D003587 ORTHO05D004139 1.0e-36 156.8 113 68.1
CiPaw.01G273300 Carya illinoinensis HOM05D003587 ORTHO05D004139 1.7e-36 156.0 111 69.4
Oeu027482.2 Olea europaea HOM05D003587 ORTHO05D004139 2.5e-35 152.1 107 71.0
Haze_16897 Corylus avellana HOM05D003587 ORTHO05D004139 4.2e-35 151.4 105 69.5
SalBow3G0063 Salvia bowleyana HOM05D003587 ORTHO05D004139 5.5e-35 151.0 105 68.6
Actinidia38276 Actinidia chinensis HOM05D003587 ORTHO05D004139 7.2e-35 150.6 108 68.5
Cfa021506 Carpinus fangiana HOM05D003587 ORTHO05D004139 1.2e-34 149.8 105 68.6
HanXRQChr01g0011501 Helianthus annuus HOM05D003587 ORTHO05D004139 6.1e-34 147.5 111 61.3
TAR633G2007 Trochodendron aralioides HOM05D003587 ORTHO05D004139 7.9e-34 147.1 116 62.1
Sabra10G0171700 Salix brachista HOM05D003587 ORTHO05D004139 1.0e-33 146.7 100 68.0
Dinv11778 Davidia involucrata HOM05D003587 ORTHO05D004139 1.8e-33 146.0 103 68.9
Prupe.2G214200 Prunus persica HOM05D003587 ORTHO05D004139 1.8e-33 146.0 105 65.7
Ciclev10031308m.g Citrus clementina HOM05D003587 ORTHO05D004139 2.3e-33 145.6 110 60.0
Migut.F01778 Erythranthe guttata HOM05D003587 ORTHO05D004139 2.3e-33 145.6 114 63.2
Peaxi162Scf00809g00432 Petunia axillaris HOM05D003587 ORTHO05D004139 5.1e-33 144.4 110 62.7
Potri.010G221900 Populus trichocarpa HOM05D003587 ORTHO05D004139 6.7e-33 144.1 103 63.1
Rhsim03G0120900 Rhododendron simsii HOM05D003587 ORTHO05D004139 8.8e-33 143.7 117 61.5
TWI15G0175 Tripterygium wilfordii HOM05D003587 ORTHO05D004139 1.5e-32 142.9 105 63.8
ECA238G1416 Erigeron canadensis HOM05D003587 ORTHO05D004139 2.0e-32 142.5 105 61.9
Nitab4.5_0000575g0260 Nicotiana tabacum HOM05D003587 ORTHO05D004139 2.0e-32 142.5 112 61.6
vmacro07076 Vaccinium macrocarpon HOM05D003587 ORTHO05D004139 5.7e-32 141.0 113 61.9
MD07G1175000 Malus domestica HOM05D003587 ORTHO05D004139 7.4e-32 140.6 105 64.8
arahy.Tifrunner.gnm1.ann1.3IGY6I Arachis hypogaea HOM05D003587 ORTHO05D004139 1.7e-31 139.4 100 63.0
arahy.Tifrunner.gnm1.ann1.TJZR4S Arachis hypogaea HOM05D003587 ORTHO05D004139 1.7e-31 139.4 100 63.0
MELO3C019793.2 Cucumis melo HOM05D003587 ORTHO05D004139 1.7e-31 139.4 101 63.4
Eucgr.G02826 Eucalyptus grandis HOM05D003587 ORTHO05D004139 1.7e-31 139.4 99 65.7
Aqoxy3G02282_Aqoxy3G02283 Aquilegia oxysepala HOM05D003587 ORTHO05D004139 2.2e-31 139.0 121 57.0
ClCG08G007470 Citrullus lanatus HOM05D003587 ORTHO05D004139 3.7e-31 138.3 108 58.3
RcHm_v2.0_Chr1g0363461 Rosa chinensis HOM05D003587 ORTHO05D004139 4.8e-31 137.9 99 66.7
Gohir.A13G024000 Gossypium hirsutum HOM05D003587 ORTHO05D004139 6.3e-31 137.5 98 63.3
Gorai.013G025600 Gossypium raimondii HOM05D003587 ORTHO05D004139 6.3e-31 137.5 98 63.3
Solyc04g049340.3 Solanum lycopersicum HOM05D003587 ORTHO05D004139 6.3e-31 137.5 103 64.1
Sopen04g019250 Solanum pennellii HOM05D003587 ORTHO05D004139 6.3e-31 137.5 103 64.1
QL08p056026 Quercus lobata HOM05D003587 ORTHO05D004139 8.2e-31 137.1 104 63.5
PGR142G0620 Punica granatum HOM05D003587 ORTHO05D004139 1.1e-30 136.7 98 66.3
CsaV3_6G036380 Cucumis sativus L. HOM05D003587 ORTHO05D004139 1.8e-30 136.0 101 61.4
Gohir.D13G022900 Gossypium hirsutum HOM05D003587 ORTHO05D004139 1.8e-30 136.0 98 62.2
CAN.G1099.11 Capsicum annuum HOM05D003587 ORTHO05D004139 4.1e-30 134.8 105 61.9
Atru.chr12.765 Acer truncatum HOM05D003587 ORTHO05D004139 9.1e-30 133.7 106 64.2
Lsat_1_v5_gn_2_114281 Lactuca sativa HOM05D003587 ORTHO05D004139 2.0e-29 132.5 101 59.4
Cc09_g02070 Coffea canephora HOM05D003587 ORTHO05D004139 1.7e-28 129.4 112 57.1
FAN10G2586 Fragaria x ananassa HOM05D003587 ORTHO05D004139 1.7e-28 129.4 104 58.7
FAN10G4213 Fragaria x ananassa HOM05D003587 ORTHO05D004139 1.7e-28 129.4 104 58.7
Nn2g10780 Nelumbo nucifera HOM05D003587 ORTHO05D004139 1.7e-28 129.4 108 55.6
FvH4_7g19650 Fragaria vesca HOM05D003587 ORTHO05D004139 2.9e-28 128.6 104 58.7
FAN06G4872 Fragaria x ananassa HOM05D003587 ORTHO05D004139 2.9e-28 128.6 104 58.7
FAN01G2474 Fragaria x ananassa HOM05D003587 ORTHO05D004139 3.8e-28 128.3 104 57.7
Sed0006152 Sechium edule HOM05D003587 ORTHO05D004139 5.0e-28 127.9 102 56.9
Glyma.16G154700 Glycine max HOM05D003587 ORTHO05D004139 8.5e-28 127.1 102 60.8
Lalb_Chr19g0129681 Lupinus albus HOM05D003587 ORTHO05D004139 1.9e-27 125.9 102 59.8
DCAR_019108 Daucus carota HOM05D003587 ORTHO05D007145 2.5e-27 125.6 103 59.2
Phvul.004G082300 Phaseolus vulgaris HOM05D003587 ORTHO05D004139 4.2e-27 124.8 102 60.8
VMungo0464G0799 Vigna mungo HOM05D003587 ORTHO05D004139 9.4e-27 123.6 102 58.8
Lj5g0014900 Lotus japonicus HOM05D003587 ORTHO05D004139 4.7e-26 121.3 102 54.9
CDE05G3302 Ceratophyllum demersum HOM05D003587 ORTHO05D004139 3.9e-25 118.2 106 53.8
PSO384G5085 Papaver somniferum HOM05D003587 ORTHO05D004139 6.7e-25 117.5 115 51.3
COL.COLO4_23686 Corchorus olitorius HOM05D003587 ORTHO05D004139 1.1e-24 116.7 85 65.9
PSO339G3050 Papaver somniferum HOM05D003587 ORTHO05D004139 2.0e-24 115.9 115 51.3
SEGI_26742 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 1.5e-16 89.7 111 42.3
SEGI_29926 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 1.5e-16 89.7 111 42.3
ATR0115G029 Amborella trichopoda HOM05D003587 ORTHO05D004139 3.7e-15 85.1 87 43.7
Pp3c8_8340 Physcomitrium patens HOM05D003587 ORTHO05D004139 5.2e-09 64.7 112 35.7
AagrBONN_evm.TU.Sc2ySwM_228.3870 Anthoceros agrestis HOM05D003587 ORTHO05D004139 8.8e-09 63.9 98 36.7
Lj1A914G42 Lonicera japonica HOM05D003587 ORTHO05D004139 1.8e-06 56.2 40 65.0
Hma1.2p1_1004F.1_g246830 Hydrangea macrophylla HOM05D003587 ORTHO05D004139 4.1e-06 55.1 45 55.6


User provided reference genes

Program Settings