Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.1e-154 550.1 295 100.0
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.1e-119 433.7 285 83.2
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 1.3e-115 420.2 286 80.8
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 2.8e-115 419.1 286 81.1
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 1.1e-114 417.2 292 81.5
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 9.2e-114 414.1 284 82.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 2.7e-113 412.5 284 82.0
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 4.5e-113 411.8 285 80.0
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 5.9e-113 411.4 287 80.5
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 7.8e-113 411.0 286 80.4
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 8.6e-112 407.5 290 79.3
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.1e-111 407.1 287 78.7
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 1.1e-111 407.1 286 79.7
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 1.9e-111 406.4 288 80.6
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 3.3e-111 405.6 286 79.0
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 3.3e-111 405.6 286 79.4
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 5.6e-111 404.8 284 79.2
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 5.6e-111 404.8 285 79.6
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 7.3e-111 404.4 241 79.7
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 9.5e-111 404.1 284 79.9
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 2.8e-110 402.5 284 78.9
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 4.7e-110 401.7 239 79.5
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 8.0e-110 401.0 285 78.9
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.0e-109 400.6 288 78.5
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 2.3e-109 399.4 235 79.6
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 2.3e-109 399.4 235 79.6
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 2.3e-109 399.4 286 79.0
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 3.1e-109 399.1 230 81.3
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 4.0e-109 398.7 287 79.1
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 5.2e-109 398.3 251 76.1
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.2e-108 397.1 241 77.6
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.2e-108 397.1 239 78.2
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.0e-108 396.4 286 78.7
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 2.0e-108 396.4 236 78.8
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.6e-108 396.0 233 79.4
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 7.5e-108 394.4 239 77.8
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 7.5e-108 394.4 241 76.8
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 7.5e-108 394.4 239 77.8
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 7.5e-108 394.4 284 79.2
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 9.8e-108 394.0 235 79.1
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 8.3e-107 391.0 285 77.5
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 8.3e-107 391.0 284 77.8
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 1.1e-106 390.6 238 79.0
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 1.4e-106 390.2 284 77.8
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 1.9e-106 389.8 286 76.9
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 3.2e-106 389.0 261 73.9
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 5.4e-106 388.3 240 77.5
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 5.4e-106 388.3 239 78.7
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 9.2e-106 387.5 221 82.4
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 1.2e-105 387.1 285 78.2
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.6e-105 386.7 296 75.7
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 1.6e-105 386.7 282 77.7
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 2.7e-105 386.0 241 75.9
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 4.6e-105 385.2 291 73.9
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 4.6e-105 385.2 240 74.2
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.6e-105 385.2 277 78.3
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 6.0e-105 384.8 237 78.5
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 7.8e-105 384.4 296 75.7
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 2.3e-104 382.9 234 77.8
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.3e-104 382.9 240 77.1
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 5.0e-104 381.7 298 74.5
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 9.5e-103 377.5 228 78.1
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 1.6e-102 376.7 268 79.1
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.1e-101 374.0 242 73.1
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 1.4e-101 373.6 241 73.9
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.4e-101 373.6 291 74.9
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 1.8e-101 373.2 244 73.4
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 3.1e-101 372.5 287 74.6
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 4.0e-101 372.1 287 74.9
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.5e-100 370.2 241 73.0
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.0e-100 369.8 239 74.5
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 2.0e-100 369.8 242 73.6
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 2.6e-100 369.4 244 73.4
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 4.4e-100 368.6 343 65.9
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 1.3e-99 367.1 243 72.4
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.3e-99 367.1 231 76.6
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 3.7e-99 365.5 244 73.0
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 1.1e-98 364.0 243 72.0
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.4e-98 363.6 288 73.3
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.9e-98 363.2 232 73.7
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 5.4e-98 361.7 240 73.3
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 7.0e-98 361.3 240 73.3
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 2.7e-97 359.4 240 70.4
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.7e-97 359.4 240 71.7
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.0e-96 357.5 273 65.9
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 1.0e-96 357.5 240 75.0
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 3.0e-96 355.9 284 74.6
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 3.0e-96 355.9 292 72.3
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 3.9e-96 355.5 292 72.3
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 1.5e-95 353.6 237 72.6
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 2.5e-95 352.8 208 78.8
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 3.3e-95 352.4 284 71.5
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 3.3e-95 352.4 240 70.4
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 3.6e-94 349.0 286 71.0
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 6.2e-94 348.2 260 66.9
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 1.4e-93 347.1 224 72.3
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 2.3e-93 346.3 210 78.6
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 1.5e-92 343.6 221 76.0
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 2.0e-92 343.2 287 70.7
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 7.5e-92 341.3 245 69.4
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 4.9e-91 338.6 290 70.3
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 1.1e-90 337.4 289 68.5
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.4e-90 337.0 289 69.2
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 3.5e-89 332.4 247 70.4
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 1.9e-87 326.6 246 67.5
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 5.6e-87 325.1 238 68.1
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 4.7e-86 322.0 295 66.8
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 1.4e-85 320.5 232 68.1
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 2.0e-84 316.6 241 67.2
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 4.4e-84 315.5 240 67.5
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 5.8e-84 315.1 245 66.5
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 1.7e-83 313.5 239 66.9
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 6.4e-83 311.6 237 67.1
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 1.4e-82 310.5 237 66.7
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 5.4e-82 308.5 237 67.1
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 1.1e-79 300.8 287 66.6
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 2.5e-79 299.7 227 77.5
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.2e-78 297.4 192 74.0
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.6e-78 297.0 196 72.4
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 1.1e-77 294.3 231 76.6
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 1.8e-77 293.5 230 65.2
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 5.8e-76 288.5 227 75.3
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 6.4e-75 285.0 297 62.6
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 3.5e-73 279.3 197 69.0
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 6.6e-72 275.0 216 66.2
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 1.1e-71 274.2 243 62.1
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 6.4e-67 258.5 244 57.4
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 8.4e-67 258.1 234 59.4
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 1.1e-63 247.7 201 62.7
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 2.5e-63 246.5 245 53.9
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 3.7e-54 216.1 247 50.2
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 3.5e-49 199.5 244 61.5
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 1.8e-45 187.2 131 68.7
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 2.0e-44 183.7 149 59.1
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 5.7e-39 165.6 266 39.8
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 5.9e-36 155.6 245 40.8
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 9.7e-31 138.3 252 36.9
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 8.2e-30 135.2 239 39.3
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 4.5e-28 129.4 161 49.1
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 5.9e-28 129.0 234 37.6
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 5.0e-27 125.9 223 40.4
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.1e-26 124.8 224 37.5
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 1.5e-26 124.4 229 39.7
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 7.2e-26 122.1 232 37.5
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 8.0e-25 118.6 226 35.8
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 5.2e-24 115.9 236 38.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.1e-23 114.8 250 33.2
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.1e-23 114.8 232 37.5
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 4.4e-23 112.8 53 96.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 5.7e-23 112.5 249 34.1
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.7e-22 110.9 235 37.0
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 2.2e-22 110.5 233 35.6
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.7e-22 109.8 242 35.1
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 8.2e-22 108.6 234 35.9
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 3.1e-21 106.7 239 33.5
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.6e-20 103.6 232 35.3
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 2.2e-19 100.5 252 33.3
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.6e-17 94.4 203 34.0
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 2.7e-17 93.6 55 76.4
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 1.0e-16 91.7 56 73.2
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 4.0e-16 89.7 201 33.8
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.2e-15 88.2 253 32.0
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.0e-15 87.4 46 82.6
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 2.4e-13 80.5 165 33.9
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 3.1e-13 80.1 134 36.6
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 4.1e-13 79.7 244 29.9
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 3.5e-12 76.6 174 32.2
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 5.9e-12 75.9 264 26.1
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 7.7e-12 75.5 177 36.7
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.9e-11 73.6 103 44.7
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 6.1e-09 65.9 34 67.6
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 1.0e-08 65.1 51 52.9
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 3.0e-08 63.5 41 63.4
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 3.4e-07 60.1 47 57.4
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 2.8e-06 57.0 161 31.7


User provided reference genes

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