Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 8.3e-43 176.8 100 100.0
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 5.1e-32 141.0 97 73.2
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 1.5e-31 139.4 96 69.8
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.3e-31 138.3 97 80.4
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 4.8e-30 134.4 100 72.0
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 3.1e-29 131.7 99 67.7
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 5.3e-29 131.0 97 75.3
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 6.9e-29 130.6 97 78.4
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 9.0e-29 130.2 100 70.0
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 9.0e-29 130.2 100 70.0
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 1.5e-28 129.4 99 69.7
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 1.5e-28 129.4 101 66.3
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.5e-28 129.4 97 64.9
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 2.0e-28 129.0 99 77.8
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 2.6e-28 128.6 97 78.4
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 2.6e-28 128.6 99 63.6
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 7.6e-28 127.1 96 65.6
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.3e-27 126.3 97 67.0
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 2.2e-27 125.6 97 63.9
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.2e-27 125.6 96 64.6
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 2.9e-27 125.2 96 63.5
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 2.9e-27 125.2 96 68.8
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 3.8e-27 124.8 97 64.9
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 4.9e-27 124.4 97 69.1
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 4.9e-27 124.4 97 61.9
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 6.4e-27 124.0 99 66.7
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 1.1e-26 123.2 97 61.9
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 1.1e-26 123.2 97 61.9
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 1.1e-26 123.2 97 61.9
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 1.1e-26 123.2 97 61.9
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.4e-26 122.9 97 68.0
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 1.4e-26 122.9 99 69.7
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.4e-26 122.9 96 62.5
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 2.4e-26 122.1 97 66.0
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 2.4e-26 122.1 95 69.5
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 3.2e-26 121.7 97 62.9
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 3.2e-26 121.7 96 67.7
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.2e-26 121.7 97 68.0
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 5.4e-26 120.9 97 64.9
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 9.3e-26 120.2 96 65.6
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 9.3e-26 120.2 97 59.8
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 9.3e-26 120.2 97 59.8
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 9.3e-26 120.2 97 59.8
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 9.3e-26 120.2 95 70.5
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 9.3e-26 120.2 97 67.0
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 9.3e-26 120.2 97 69.1
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 9.3e-26 120.2 95 66.3
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.2e-25 119.8 97 59.8
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 2.1e-25 119.0 97 59.8
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 2.7e-25 118.6 99 70.7
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 2.7e-25 118.6 97 62.9
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 3.5e-25 118.2 97 58.8
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 3.5e-25 118.2 95 62.1
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 3.5e-25 118.2 97 59.8
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.5e-25 118.2 85 77.6
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.5e-25 118.2 85 77.6
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 4.6e-25 117.9 95 60.0
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 4.6e-25 117.9 97 57.7
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 6.0e-25 117.5 101 68.3
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 6.0e-25 117.5 97 61.9
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 1.0e-24 116.7 97 62.9
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 1.0e-24 116.7 99 59.6
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.0e-24 116.7 97 60.8
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 1.7e-24 115.9 97 57.7
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 2.3e-24 115.5 94 67.0
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.0e-24 115.2 96 62.5
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 3.0e-24 115.2 94 60.6
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.9e-24 114.8 95 67.4
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 3.9e-24 114.8 95 67.4
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 3.9e-24 114.8 95 62.1
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 5.1e-24 114.4 95 61.1
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 6.6e-24 114.0 96 63.5
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 8.7e-24 113.6 87 60.9
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 8.7e-24 113.6 96 66.7
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 8.7e-24 113.6 97 71.1
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 8.7e-24 113.6 97 73.2
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.5e-23 112.1 95 66.3
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 3.3e-23 111.7 97 61.9
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 3.3e-23 111.7 97 61.9
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.3e-23 111.3 95 67.4
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.3e-23 111.3 95 69.5
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 5.6e-23 110.9 95 56.8
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 5.6e-23 110.9 95 61.1
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 9.6e-23 110.2 97 59.8
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 9.6e-23 110.2 98 58.2
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 9.6e-23 110.2 95 63.2
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 1.3e-22 109.8 94 61.7
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.6e-22 109.4 95 58.9
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.6e-22 109.4 95 58.9
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 1.6e-22 109.4 96 60.4
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 1.6e-22 109.4 96 60.4
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 2.1e-22 109.0 93 66.7
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.1e-22 109.0 98 57.1
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.1e-22 109.0 98 57.1
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 2.1e-22 109.0 94 72.3
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.8e-22 108.6 98 57.1
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.8e-22 108.6 98 57.1
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 4.8e-22 107.8 98 57.1
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 1.1e-21 106.7 97 58.8
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.4e-21 106.3 98 55.1
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.8e-21 105.9 97 57.7
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 6.9e-21 104.0 95 63.2
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 9.0e-21 103.6 108 52.8
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.2e-20 103.2 82 59.8
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 2.6e-20 102.1 97 60.8
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 4.5e-20 101.3 97 55.7
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.2e-19 99.0 101 54.5
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.1e-18 96.7 101 52.5
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.7e-17 92.0 92 55.4
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 2.3e-16 89.0 97 57.7
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 8.7e-16 87.0 97 52.6
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 8.7e-16 87.0 95 51.6
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 3.3e-15 85.1 90 47.8
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.6e-15 84.3 95 51.6
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 4.8e-14 81.3 96 47.9
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.8e-13 79.3 81 51.9
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 4.0e-13 78.2 87 51.7
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 5.3e-13 77.8 100 51.0
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 6.9e-13 77.4 63 63.5
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 6.9e-13 77.4 86 52.3
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.6e-12 75.5 98 45.9
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 4.5e-12 74.7 80 57.5
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 1.0e-11 73.6 96 47.9
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.7e-11 72.8 100 43.0
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 3.8e-11 71.6 100 47.0
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 1.1e-07 60.1 44 72.7


User provided reference genes

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