Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 4.7e-158 561.2 297 100.0
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.0e-109 398.7 299 74.9
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.7e-97 359.4 301 67.1
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 3.5e-89 332.4 304 63.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.5e-87 327.0 301 67.1
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.3e-83 313.9 323 62.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 4.6e-81 305.4 221 71.5
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.6e-81 305.4 274 62.8
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.3e-80 303.9 311 57.6
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.3e-80 303.9 297 59.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 8.7e-80 301.2 297 58.6
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.6e-78 297.0 215 70.7
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.7e-78 295.8 229 69.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.1e-77 292.7 242 65.7
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.5e-76 288.9 241 61.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.8e-76 288.5 297 57.2
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.8e-76 288.5 220 69.5
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 7.6e-76 288.1 293 55.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 7.6e-76 288.1 236 62.7
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 1.3e-75 287.3 269 59.5
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.9e-75 286.2 217 67.3
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.8e-75 285.8 224 67.0
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 8.4e-75 284.6 217 66.8
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.4e-74 283.9 238 65.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.4e-74 283.9 225 66.2
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 4.2e-74 282.3 228 66.2
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 7.1e-74 281.6 225 64.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 9.3e-74 281.2 224 67.9
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.7e-73 279.6 301 56.5
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.5e-73 279.3 216 67.1
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 4.6e-73 278.9 270 56.7
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.6e-73 278.9 225 66.2
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 4.6e-73 278.9 240 63.3
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.8e-72 276.9 280 54.3
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.3e-72 276.6 238 62.6
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.3e-72 276.6 306 56.5
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 3.9e-72 275.8 241 61.8
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 3.9e-72 275.8 246 61.4
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.9e-72 275.8 228 63.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 6.7e-72 275.0 297 54.9
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 8.7e-72 274.6 226 62.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.5e-71 273.9 302 54.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.9e-71 273.5 240 62.5
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.5e-71 273.1 213 66.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.5e-71 273.1 269 58.0
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.3e-71 272.7 259 56.8
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 5.7e-71 271.9 239 64.0
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 9.7e-71 271.2 250 60.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.6e-70 270.4 258 58.1
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.2e-70 270.0 257 59.1
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.1e-69 267.7 237 62.4
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 2.4e-69 266.5 233 61.4
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.1e-69 265.8 269 57.6
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.5e-68 263.8 310 51.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.5e-68 263.8 222 63.5
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 2.0e-68 263.5 193 71.0
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 2.6e-68 263.1 231 60.6
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 5.9e-68 261.9 304 51.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 7.7e-68 261.5 224 63.4
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 7.7e-68 261.5 224 63.4
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.0e-67 261.2 321 50.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.9e-67 259.6 213 64.3
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 6.5e-67 258.5 213 63.8
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.5e-66 256.5 213 62.9
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.2e-65 254.2 301 49.2
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 2.3e-64 250.0 175 71.4
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 5.1e-64 248.8 224 61.2
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 7.4e-63 245.0 265 53.6
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.2e-62 243.4 259 55.6
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 6.3e-62 241.9 273 53.1
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.4e-61 240.0 219 59.8
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.4e-61 240.0 317 48.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 9.1e-61 238.0 308 49.7
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.2e-60 237.7 316 49.7
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.5e-60 237.3 308 49.7
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.5e-60 237.3 299 47.8
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.6e-60 236.5 189 65.6
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 7.7e-60 235.0 182 69.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 5.0e-59 232.3 271 48.0
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.5e-59 231.9 214 56.5
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.5e-59 231.9 194 63.4
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 8.5e-59 231.5 194 62.9
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.4e-58 230.7 264 53.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.2e-58 229.6 308 49.0
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.2e-58 229.2 263 53.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 5.5e-58 228.8 211 56.4
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 7.2e-58 228.4 185 64.3
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 9.4e-58 228.0 314 53.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.3e-56 223.4 190 63.2
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.7e-56 221.9 259 51.0
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 3.3e-55 219.5 265 51.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.7e-54 217.2 265 50.9
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 3.7e-54 216.1 202 55.9
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.5e-52 210.7 174 62.6
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 5.9e-52 208.8 261 49.8
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.6e-49 200.7 200 58.5
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 6.7e-48 195.3 178 61.2
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.0e-47 193.7 152 65.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.1e-45 186.4 145 65.5
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 5.9e-44 182.2 200 53.5
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.2e-43 180.3 183 60.1
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.2e-42 176.0 259 47.5
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.5e-42 175.6 147 61.9
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 6.8e-40 168.7 215 45.1
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.4e-39 166.4 213 50.2
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.8e-38 162.5 147 58.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.3e-35 154.5 113 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.9e-34 150.6 143 53.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 4.7e-33 146.0 191 45.5
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.8e-32 144.1 251 43.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.5e-31 141.0 192 48.4
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 2.8e-30 136.7 171 49.7
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.8e-27 126.3 115 60.0
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 2.8e-22 110.2 92 64.1
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.6e-20 104.4 176 34.1
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.9e-19 100.1 239 33.5
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 5.2e-16 89.4 191 34.0
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.3e-14 84.7 81 58.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.4e-13 80.5 69 66.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.5e-10 71.2 91 47.3
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 8.0e-09 65.5 53 56.6


User provided reference genes

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