Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 3.3e-122 441.8 238 100.0
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.7e-102 376.3 225 86.7
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 9.7e-98 360.5 232 82.3
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 9.7e-98 360.5 224 80.4
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 6.3e-97 357.8 223 79.4
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.0e-95 352.8 223 79.4
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 7.2e-93 344.4 229 78.6
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.1e-92 342.8 220 78.6
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 2.1e-92 342.8 225 78.7
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 3.6e-92 342.0 224 77.7
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 4.7e-92 341.7 222 80.2
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 3.9e-91 338.6 227 78.4
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 8.8e-91 337.4 224 76.3
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 1.5e-90 336.7 227 76.2
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 2.6e-90 335.9 223 75.3
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 5.7e-90 334.7 229 74.7
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 7.4e-90 334.3 222 74.3
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.4e-90 334.3 222 74.3
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.4e-90 334.3 222 74.3
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.4e-90 334.3 222 74.3
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 9.7e-90 334.0 225 76.0
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 1.3e-89 333.6 225 72.9
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.8e-89 332.4 231 74.5
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 6.3e-89 331.3 222 73.9
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 8.2e-89 330.9 227 77.5
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.1e-88 330.5 223 74.9
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.4e-88 330.1 224 75.9
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.4e-88 330.1 224 75.9
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 1.8e-88 329.7 224 76.8
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 1.8e-88 329.7 227 78.0
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.8e-88 329.7 227 77.5
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 2.4e-88 329.3 227 76.7
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 4.1e-88 328.6 226 72.6
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 9.1e-88 327.4 224 75.4
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.6e-87 326.6 224 74.6
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 2.0e-87 326.2 224 75.4
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 2.0e-87 326.2 229 75.1
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.6e-87 325.9 225 75.1
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.6e-87 325.9 225 75.1
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 2.6e-87 325.9 225 71.6
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 3.5e-87 325.5 224 74.1
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.5e-87 325.1 216 76.9
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 5.9e-87 324.7 224 74.1
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 7.7e-87 324.3 220 75.9
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 7.7e-87 324.3 220 75.9
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 1.3e-86 323.6 227 74.4
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.3e-86 323.6 222 74.8
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.7e-86 323.2 224 74.6
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.2e-86 322.8 224 74.1
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.8e-86 322.0 227 72.2
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 1.1e-85 320.5 223 72.2
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.1e-85 320.5 225 72.4
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 2.5e-85 319.3 230 73.5
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 5.5e-85 318.2 225 72.0
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 5.5e-85 318.2 225 72.4
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 9.4e-85 317.4 222 75.7
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.2e-84 317.0 219 76.7
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 4.7e-84 315.1 201 79.1
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.7e-84 315.1 226 69.9
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 8.0e-84 314.3 228 75.0
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.0e-83 313.9 253 67.2
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 1.2e-82 310.5 222 73.4
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 3.3e-82 308.9 225 70.2
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 3.3e-82 308.9 222 71.6
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 7.5e-82 307.8 225 69.3
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.1e-80 303.9 221 69.2
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.4e-80 302.8 231 69.3
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 3.1e-80 302.4 221 68.8
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 4.5e-79 298.5 224 69.6
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 2.2e-78 296.2 175 81.1
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 2.9e-78 295.8 205 71.2
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 2.9e-78 295.8 231 68.4
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 1.8e-75 286.6 227 67.0
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 6.8e-75 284.6 229 67.2
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.6e-74 282.7 229 67.7
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.4e-74 282.3 227 65.2
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.7e-73 280.0 223 65.9
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 2.2e-73 279.6 225 66.7
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 8.3e-73 277.7 224 65.2
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.2e-71 273.9 227 63.9
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 2.0e-71 273.1 194 71.1
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 3.5e-71 272.3 233 65.2
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.3e-70 270.4 198 67.7
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 3.6e-68 262.3 225 63.6
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 6.8e-67 258.1 221 60.2
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 8.9e-67 257.7 224 61.2
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 4.9e-65 251.9 230 62.6
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 9.2e-64 247.7 167 72.5
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 1.6e-63 246.9 218 61.9
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.7e-62 243.4 228 59.6
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 2.3e-62 243.0 227 59.5
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 6.1e-60 235.0 181 66.9
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 8.9e-59 231.1 175 67.4
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 4.4e-58 228.8 134 82.1
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 1.9e-56 223.4 134 82.1
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.3e-54 216.5 131 82.4
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 3.6e-52 209.1 131 77.1
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 4.0e-51 205.7 138 74.6
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 3.5e-47 192.6 113 85.8
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 2.3e-46 189.9 230 52.2
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.8e-44 183.0 95 90.5
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 6.2e-44 181.8 165 55.2
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 8.1e-44 181.4 181 51.9
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 3.1e-43 179.5 182 50.0
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 1.1e-40 171.0 224 50.0
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.1e-39 166.8 177 48.6
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 2.5e-37 159.8 149 52.3
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.2e-34 151.0 131 61.1
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 9.9e-34 147.9 133 60.9
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 1.1e-29 134.4 159 44.0
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.8e-28 129.8 224 41.5
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 2.4e-27 126.7 92 69.6
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 7.3e-21 105.1 91 62.6
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 8.1e-20 101.7 57 87.7
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 7.4e-13 78.6 142 27.5
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 1.3e-12 77.8 217 28.1
Cre03.g146167 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D008890 2.5e-08 63.5 201 28.9
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 4.6e-07 59.3 123 30.9


User provided reference genes

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