Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7938 Avicennia marina HOM05D000233 ORTHO05D000020 1.4e-159 566.2 288 100.0
Migut.K00605 Erythranthe guttata HOM05D000233 ORTHO05D000020 1.8e-34 150.6 310 41.6
Oeu026224.1 Olea europaea HOM05D000233 ORTHO05D000020 2.4e-34 150.2 295 44.1
SalBow2G1528 Salvia bowleyana HOM05D000233 ORTHO05D000020 9.2e-26 121.7 273 41.8
Cfa009216 Carpinus fangiana HOM05D000233 ORTHO05D000020 2.0e-20 104.0 297 32.0
Haze_12253 Corylus avellana HOM05D000233 ORTHO05D000020 6.4e-19 99.0 295 32.5
Thecc.02G260900 Theobroma cacao HOM05D000233 ORTHO05D000020 6.4e-19 99.0 312 35.6
unitig_8.g2933 Utricularia gibba HOM05D000233 ORTHO05D000020 1.1e-18 98.2 235 35.3
QL03p057826 Quercus lobata HOM05D000233 ORTHO05D000020 1.7e-16 90.9 297 31.0
Peaxi162Scf00145g00045 Petunia axillaris HOM05D000233 ORTHO05D000020 2.3e-16 90.5 312 33.0
Duzib251G0526 Durio zibethinus HOM05D000233 ORTHO05D000020 5.0e-16 89.4 308 36.0
Gohir.A03G135000 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.5e-15 87.8 305 30.8
Oeu056709.1 Olea europaea HOM05D000233 ORTHO05D000020 2.5e-15 87.0 270 33.0
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 2.5e-15 87.0 292 35.3
TAR629G1777 Trochodendron aralioides HOM05D000233 ORTHO05D000020 5.6e-15 85.9 291 34.0
Gorai.005G177900 Gossypium raimondii HOM05D000233 ORTHO05D000020 9.5e-15 85.1 306 30.4
Gohir.D02G158500 Gossypium hirsutum HOM05D000233 ORTHO05D000020 6.2e-14 82.4 306 30.1
Hma1.2p1_0079F.1_g040990 Hydrangea macrophylla HOM05D000233 ORTHO05D000020 1.4e-13 81.3 302 29.1
Cc11_g15790 Coffea canephora HOM05D000233 ORTHO05D000020 1.2e-12 78.2 202 37.1
Duzib268G0734 Durio zibethinus HOM05D000233 ORTHO05D000020 2.0e-12 77.4 304 32.9
Dinv14725 Davidia involucrata HOM05D000233 ORTHO05D000020 2.6e-12 77.0 289 30.8
CiPaw.05G181500 Carya illinoinensis HOM05D000233 ORTHO05D000020 3.4e-12 76.6 301 29.9
Nitab4.5_0000740g0070 Nicotiana tabacum HOM05D000233 ORTHO05D000020 4.4e-12 76.3 319 29.2
Nitab4.5_0000979g0050 Nicotiana tabacum HOM05D000233 ORTHO05D000020 9.8e-12 75.1 296 30.7
CAN.G493.3 Capsicum annuum HOM05D000233 ORTHO05D000020 6.4e-11 72.4 311 30.9
COL.COLO4_24281 Corchorus olitorius HOM05D000233 ORTHO05D000020 2.4e-10 70.5 319 31.0
CiPaw.06G067500 Carya illinoinensis HOM05D000233 ORTHO05D000020 5.4e-10 69.3 276 30.8
SalBow8G4106 Salvia bowleyana HOM05D000233 ORTHO05D000020 5.4e-10 69.3 288 30.2
Peaxi162Scf00128g10022 Petunia axillaris HOM05D000233 ORTHO05D000020 7.1e-10 68.9 300 31.3
unitig_26.g10345 Utricularia gibba HOM05D000233 ORTHO05D000020 9.2e-10 68.6 139 34.5
CiPaw.06G067700 Carya illinoinensis HOM05D000233 ORTHO05D000020 1.6e-09 67.8 301 30.2
PGSC0003DMG400018613 Solanum tuberosum HOM05D000233 ORTHO05D000020 1.6e-09 67.8 265 28.7
Solyc05g013540.1 Solanum lycopersicum HOM05D000233 ORTHO05D000020 2.7e-09 67.0 285 28.4
Lj6P813T15 Lonicera japonica HOM05D000233 ORTHO05D000020 4.6e-09 66.2 297 29.0
Nn3g16697 Nelumbo nucifera HOM05D000233 ORTHO05D000020 7.8e-09 65.5 296 27.4
Manes.12G022600 Manihot esculenta HOM05D000233 ORTHO05D000020 1.3e-08 64.7 318 30.5
Nn4g22600 Nelumbo nucifera HOM05D000233 ORTHO05D000020 3.0e-08 63.5 296 28.4
Prupe.1G245500 Prunus persica HOM05D000233 ORTHO05D000020 5.1e-08 62.8 283 27.6
CSS0047280 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 8.6e-08 62.0 262 30.2
Gohir.D01G151200 Gossypium hirsutum HOM05D000233 ORTHO05D000020 8.6e-08 62.0 310 30.0
Gorai.002G187500 Gossypium raimondii HOM05D000233 ORTHO05D000020 1.5e-07 61.2 310 30.0
unitig_747.g21155 Utricularia gibba HOM05D000233 ORTHO05D000020 1.9e-07 60.8 294 30.3
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 3.3e-07 60.1 196 33.2
Sopen05g008450 Solanum pennellii HOM05D000233 ORTHO05D000020 5.6e-07 59.3 288 29.5
Atru.chr11.2142 Acer truncatum HOM05D000233 ORTHO05D000020 7.3e-07 58.9 170 32.4
Nitab4.5_0005505g0020 Nicotiana tabacum HOM05D000233 ORTHO05D000020 2.8e-06 57.0 198 33.3
Gohir.A01G159100 Gossypium hirsutum HOM05D000233 ORTHO05D000020 6.2e-06 55.8 305 28.9


User provided reference genes

Program Settings