Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 7.4e-69 263.8 142 100.0
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 2.6e-58 228.8 142 88.0
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 7.2e-56 220.7 151 80.1
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 4.5e-50 201.4 144 73.6
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 2.9e-49 198.7 141 78.7
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 2.1e-47 192.6 135 73.3
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.4e-45 184.9 146 65.8
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 1.7e-44 183.0 147 66.7
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 1.8e-43 179.5 147 63.9
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 1.8e-43 179.5 152 68.4
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 5.3e-43 177.9 148 63.5
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 9.4e-40 167.2 113 72.6
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 1.2e-39 166.8 113 72.6
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 2.1e-39 166.0 113 71.7
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 2.7e-39 165.6 113 72.6
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 3.6e-39 165.2 129 65.9
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 3.6e-39 165.2 114 71.1
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 6.1e-39 164.5 114 71.9
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 6.1e-39 164.5 113 71.7
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 6.1e-39 164.5 126 67.5
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 7.9e-39 164.1 114 70.2
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 1.4e-38 163.3 114 71.1
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 1.8e-38 162.9 114 70.2
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 1.8e-38 162.9 137 63.5
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 2.3e-38 162.5 114 71.1
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 5.2e-38 161.4 114 69.3
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 5.2e-38 161.4 114 69.3
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 5.2e-38 161.4 114 69.3
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 6.7e-38 161.0 113 69.9
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 6.7e-38 161.0 114 68.4
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 8.8e-38 160.6 114 70.2
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 1.1e-37 160.2 117 73.5
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 1.1e-37 160.2 114 69.3
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 1.5e-37 159.8 114 68.4
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 2.0e-37 159.5 114 68.4
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 2.6e-37 159.1 114 68.4
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 2.6e-37 159.1 114 68.4
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 2.6e-37 159.1 114 69.3
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 2.6e-37 159.1 114 69.3
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 2.6e-37 159.1 114 69.3
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 4.4e-37 158.3 114 67.5
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 7.4e-37 157.5 114 66.7
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 9.7e-37 157.1 110 70.9
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 9.7e-37 157.1 114 68.4
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 9.7e-37 157.1 135 60.0
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 1.3e-36 156.8 114 67.5
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 1.7e-36 156.4 114 67.5
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 2.8e-36 155.6 112 67.0
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 2.8e-36 155.6 114 67.5
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 4.8e-36 154.8 113 68.1
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 1.1e-35 153.7 113 65.5
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 1.8e-35 152.9 141 56.7
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 2.4e-35 152.5 118 66.9
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 2.4e-35 152.5 115 68.7
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 4.1e-35 151.8 151 57.0
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 4.1e-35 151.8 117 65.8
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 4.1e-35 151.8 141 57.4
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 5.3e-35 151.4 110 69.1
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.3e-35 151.4 121 63.6
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 9.1e-35 150.6 117 66.7
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 9.1e-35 150.6 111 66.7
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 1.6e-34 149.8 112 67.9
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 2.6e-34 149.1 114 62.3
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 2.6e-34 149.1 114 64.0
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 2.6e-34 149.1 114 64.9
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 3.5e-34 148.7 110 66.4
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 3.5e-34 148.7 112 67.9
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 3.5e-34 148.7 87 82.8
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 3.5e-34 148.7 114 66.7
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 4.5e-34 148.3 115 65.2
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 4.5e-34 148.3 150 57.3
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 4.5e-34 148.3 114 62.3
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 4.5e-34 148.3 138 56.5
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 4.5e-34 148.3 138 56.5
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 5.9e-34 147.9 125 60.0
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 5.9e-34 147.9 111 65.8
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 7.7e-34 147.5 114 61.4
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 7.7e-34 147.5 134 57.5
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 1.0e-33 147.1 112 62.5
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 1.3e-33 146.7 145 57.2
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 2.9e-33 145.6 114 60.5
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 2.9e-33 145.6 111 64.9
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 6.5e-33 144.4 85 80.0
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 8.5e-33 144.1 137 56.9
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 8.5e-33 144.1 137 57.7
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 8.5e-33 144.1 123 61.0
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 1.1e-32 143.7 114 62.3
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 1.1e-32 143.7 111 64.9
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 1.5e-32 143.3 137 56.9
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 3.2e-32 142.1 124 59.7
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.6e-31 139.8 127 55.9
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 1.6e-31 139.8 127 55.9
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 1.8e-30 136.3 111 61.3
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 2.3e-30 136.0 114 55.3
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 6.7e-30 134.4 114 57.9
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 2.6e-29 132.5 148 48.6
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 4.8e-28 128.3 169 43.8
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 1.1e-27 127.1 98 59.2
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.4e-27 126.7 81 76.5
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 2.4e-27 125.9 131 52.7
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 9.1e-27 124.0 82 70.7
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.7e-26 122.5 114 57.9
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 4.5e-26 121.7 137 48.2
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 5.9e-26 121.3 91 62.6
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 1.0e-25 120.6 116 57.8
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.2e-25 119.4 114 57.0
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 2.2e-25 119.4 152 46.1
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 3.8e-25 118.6 93 63.4
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 3.8e-25 118.6 97 61.9
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 6.5e-25 117.9 118 55.1
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 6.5e-25 117.9 111 56.8
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 1.1e-24 117.1 114 56.1
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 1.1e-24 117.1 111 56.8
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.1e-24 117.1 108 58.3
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.5e-24 116.7 119 55.5
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 1.9e-24 116.3 110 50.9
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.2e-23 113.6 114 52.6
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 1.6e-23 113.2 128 52.3
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 2.6e-21 105.9 67 74.6
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 1.3e-20 103.6 97 49.5
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 1.2e-18 97.1 67 64.2
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 2.7e-18 95.9 65 66.2
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 7.7e-18 94.4 67 61.2
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 7.2e-16 87.8 82 56.1
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 4.4e-13 78.6 66 54.5
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 1.6e-10 70.1 80 51.2
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 2.0e-10 69.7 59 55.9
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 4.5e-10 68.6 85 60.0
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 6.6e-09 64.7 50 58.0
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 4.7e-07 58.5 50 52.0


User provided reference genes

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