Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 8.6e-207 723.4 360 100.0
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.7e-144 515.0 348 72.7
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.1e-142 510.4 321 77.3
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.8e-141 505.8 337 75.1
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 8.2e-141 504.2 336 72.3
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.0e-139 499.6 345 71.9
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.6e-139 499.2 335 73.4
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.0e-138 497.3 331 74.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 8.5e-138 494.2 341 71.6
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.9e-137 493.0 339 72.3
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 7.2e-137 491.1 368 69.0
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-136 490.3 336 72.9
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.2e-136 490.3 336 72.9
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.1e-136 489.6 310 77.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.7e-136 488.4 339 72.3
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.8e-135 486.5 342 70.8
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.0e-135 485.7 339 72.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.9e-135 485.3 322 73.9
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.9e-135 485.3 339 71.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 7.4e-134 481.1 340 70.9
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 9.7e-134 480.7 334 71.9
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.7e-134 480.7 333 72.4
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 9.7e-134 480.7 286 80.8
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 4.8e-133 478.4 338 70.1
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.1e-132 477.2 347 69.5
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.4e-132 476.9 395 63.3
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.8e-132 476.5 336 69.9
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.4e-132 476.1 335 71.9
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 4.1e-132 475.3 307 75.2
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 9.1e-132 474.2 337 72.1
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 2.6e-131 472.6 338 69.5
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.3e-130 470.3 288 77.1
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.2e-130 469.5 312 72.8
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.1e-129 467.2 313 75.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.1e-129 467.2 338 68.6
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.2e-129 465.3 338 68.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.2e-128 463.8 347 68.3
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.0e-127 460.7 345 67.0
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 1.0e-127 460.7 347 66.3
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.4e-127 460.3 279 77.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.8e-127 459.9 344 67.2
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.3e-127 459.5 334 69.8
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.0e-127 458.8 347 67.4
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.2e-127 458.4 338 68.3
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 8.8e-127 457.6 294 73.1
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 4.4e-126 455.3 293 74.7
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 5.7e-126 454.9 334 68.0
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 5.7e-126 454.9 383 61.4
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 7.5e-126 454.5 329 69.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 7.5e-126 454.5 339 68.1
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 7.5e-126 454.5 322 67.7
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.7e-125 453.4 328 68.9
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.8e-125 452.6 285 76.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.8e-125 452.6 308 73.1
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 3.7e-125 452.2 333 68.8
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 3.7e-125 452.2 320 70.6
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.8e-125 451.8 342 67.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.3e-125 451.4 342 68.1
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.4e-124 449.5 338 67.2
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 7.0e-124 448.0 339 67.3
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.2e-123 447.2 297 71.7
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.6e-123 446.8 317 69.1
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.6e-123 446.8 317 69.1
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.6e-123 446.8 316 69.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 2.0e-123 446.4 324 67.3
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.5e-123 445.7 324 67.6
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.2e-122 443.0 318 68.2
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 2.2e-122 443.0 284 73.2
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 2.9e-122 442.6 318 68.6
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 8.5e-122 441.0 319 68.3
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.5e-121 440.3 314 71.0
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.9e-121 439.9 318 67.9
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.9e-121 439.9 322 68.6
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.9e-121 439.9 319 68.3
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.5e-121 439.5 295 70.8
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 7.2e-121 438.0 338 66.9
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.2e-120 437.2 322 68.3
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.1e-120 436.4 285 73.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.8e-119 433.3 362 62.2
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 5.2e-119 431.8 283 73.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.0e-118 429.9 296 72.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 4.1e-116 422.2 413 55.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.0e-114 415.2 279 72.8
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 5.5e-113 411.8 311 65.6
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.2e-112 410.6 335 63.6
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.6e-112 410.2 263 74.9
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 3.6e-112 409.1 317 65.0
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 1.2e-110 404.1 303 66.0
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 5.7e-110 401.7 403 53.6
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.0e-107 393.3 295 65.8
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.1e-105 387.5 325 63.1
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.3e-101 374.0 342 58.2
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.2e-96 357.5 315 60.6
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 4.7e-96 355.5 319 54.5
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 9.2e-92 341.3 299 55.2
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.6e-88 329.3 318 56.9
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.3e-87 326.6 275 60.0
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 3.1e-87 326.2 350 54.0
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.4e-84 317.4 267 54.7
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 5.1e-82 308.9 255 58.4
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 8.1e-80 301.6 279 56.6
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.4e-76 290.0 157 82.2
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.1e-68 261.9 151 82.1
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.3e-65 253.1 198 62.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.4e-60 236.9 155 72.9
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.9e-57 227.3 134 78.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 9.6e-57 224.9 135 77.0
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 2.8e-56 223.4 271 43.9
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.5e-49 200.3 287 42.5
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.2e-46 191.4 134 64.9
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.2e-40 170.6 97 80.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.4e-31 141.4 290 32.1
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 6.9e-31 139.0 269 32.0
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.0e-30 137.5 323 32.8
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.7e-16 91.3 49 75.5
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.3e-15 86.3 103 45.6
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.0e-10 70.1 86 47.7
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 8.8e-10 68.9 53 56.6


User provided reference genes

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