Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.0e-60 236.5 116 100.0
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.4e-41 172.9 108 76.9
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 3.1e-41 171.8 102 79.4
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 2.0e-40 169.1 115 71.3
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.2e-38 161.4 115 68.7
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.2e-37 159.8 115 67.8
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.6e-37 159.5 96 75.0
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 3.6e-37 158.3 107 68.2
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 3.6e-37 158.3 102 71.6
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 6.1e-37 157.5 106 69.8
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 7.9e-37 157.1 112 69.6
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.8e-36 156.0 109 69.7
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.3e-36 155.6 115 63.5
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.1e-36 154.5 115 63.5
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.1e-35 153.3 109 67.9
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.1e-35 153.3 113 63.7
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.1e-35 153.3 108 66.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.5e-35 152.9 107 69.2
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 2.0e-35 152.5 115 63.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.0e-35 152.5 100 72.0
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.4e-35 151.4 107 68.2
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 4.4e-35 151.4 98 71.4
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 5.7e-35 151.0 115 62.6
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 7.4e-35 150.6 101 73.3
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 9.7e-35 150.2 109 66.1
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.3e-34 149.8 116 63.8
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.3e-34 149.8 96 72.9
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.3e-34 149.8 104 68.3
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 1.3e-34 149.8 95 69.5
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 2.2e-34 149.1 109 66.1
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.2e-34 149.1 88 75.0
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.2e-34 149.1 104 70.2
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 2.8e-34 148.7 76 89.5
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.8e-34 148.7 98 70.4
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 3.7e-34 148.3 109 64.2
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 3.7e-34 148.3 88 72.7
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 3.7e-34 148.3 100 67.0
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 4.8e-34 147.9 93 72.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 4.8e-34 147.9 87 75.9
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 6.3e-34 147.5 109 65.1
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 8.2e-34 147.1 106 65.1
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.1e-33 146.7 103 68.0
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.4e-33 146.4 112 65.2
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.4e-33 145.6 95 69.5
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 2.4e-33 145.6 99 66.7
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.1e-33 145.2 112 58.0
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 3.1e-33 145.2 109 63.3
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 4.1e-33 144.8 113 61.1
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 5.3e-33 144.4 101 65.3
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 5.3e-33 144.4 101 65.3
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 5.3e-33 144.4 101 65.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 5.3e-33 144.4 109 63.3
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 5.3e-33 144.4 101 69.3
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 7.0e-33 144.1 102 67.6
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 9.1e-33 143.7 103 66.0
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 9.1e-33 143.7 113 61.1
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 9.1e-33 143.7 90 71.1
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 9.1e-33 143.7 77 81.8
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.2e-32 143.3 101 65.3
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.2e-32 143.3 98 66.3
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.5e-32 142.9 112 59.8
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.5e-32 142.9 90 71.1
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.0e-32 142.5 101 64.4
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 2.0e-32 142.5 110 60.9
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 2.6e-32 142.1 109 63.3
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 2.6e-32 142.1 89 71.9
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.6e-32 142.1 108 62.0
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 3.5e-32 141.7 98 68.4
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 4.5e-32 141.4 90 68.9
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 4.5e-32 141.4 112 58.9
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 4.5e-32 141.4 112 58.9
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 4.5e-32 141.4 105 62.9
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 5.9e-32 141.0 101 64.4
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 5.9e-32 141.0 101 64.4
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 7.7e-32 140.6 101 63.4
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 7.7e-32 140.6 116 58.6
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 1.0e-31 140.2 101 63.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.3e-31 139.8 109 61.5
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.7e-31 139.4 116 59.5
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.7e-31 139.4 76 81.6
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.2e-31 139.0 116 59.5
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.2e-31 139.0 116 59.5
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 2.2e-31 139.0 76 84.2
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 5.0e-31 137.9 107 62.6
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.1e-30 136.7 96 66.7
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.5e-30 136.3 87 70.1
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.9e-30 136.0 112 58.0
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.2e-29 133.3 79 78.5
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.7e-29 132.1 117 57.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 8.8e-28 127.1 109 59.6
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.1e-27 126.7 76 75.0
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 7.4e-27 124.0 100 58.0
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 9.7e-27 123.6 92 63.0
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.3e-26 123.2 107 54.2
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 8.2e-26 120.6 100 59.0
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.7e-24 114.0 94 58.5
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 3.8e-23 111.7 90 61.1
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 2.5e-22 109.0 84 61.9
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.7e-21 105.5 88 58.0
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 4.7e-21 104.8 97 50.5
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 8.0e-21 104.0 104 45.2
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.0e-20 102.1 87 55.2
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.2e-19 100.1 107 46.7
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 2.4e-17 92.4 76 59.2
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 4.5e-16 88.2 67 62.7
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.1e-13 79.3 118 37.3
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 7.0e-09 64.3 105 36.2


User provided reference genes

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