Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.1e-113 413.3 209 100.0
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.1e-89 333.6 212 81.1
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 3.5e-83 312.0 189 81.5
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 1.9e-81 306.2 200 77.0
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 4.5e-75 285.0 207 72.0
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 2.9e-74 282.3 234 65.8
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 2.3e-71 272.7 160 82.5
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 5.2e-71 271.6 161 81.4
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 6.8e-71 271.2 153 83.7
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 8.9e-71 270.8 163 78.5
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 8.9e-71 270.8 163 78.5
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 8.9e-71 270.8 163 78.5
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.2e-70 270.4 189 73.5
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 2.0e-70 269.6 185 74.6
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 2.0e-70 269.6 153 83.7
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 2.0e-70 269.6 153 83.7
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 3.4e-70 268.9 163 77.9
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 5.8e-70 268.1 163 79.1
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 7.5e-70 267.7 158 80.4
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 7.5e-70 267.7 159 81.1
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 7.5e-70 267.7 174 75.3
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 7.5e-70 267.7 153 83.0
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.7e-69 266.5 161 77.0
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 2.2e-69 266.2 163 78.5
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 2.2e-69 266.2 163 77.9
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 2.9e-69 265.8 163 80.4
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 3.7e-69 265.4 160 77.5
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.7e-69 265.4 153 81.0
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 4.9e-69 265.0 163 79.1
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 4.9e-69 265.0 179 74.9
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 6.4e-69 264.6 160 78.8
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 6.4e-69 264.6 168 75.0
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.1e-68 263.8 152 82.2
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.4e-68 263.5 190 71.1
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 2.4e-68 262.7 172 74.4
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.4e-68 262.7 158 82.3
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 3.2e-68 262.3 156 80.1
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 4.1e-68 261.9 180 71.7
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 4.1e-68 261.9 207 67.1
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 4.1e-68 261.9 207 67.1
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 1.2e-67 260.4 153 81.7
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.6e-67 260.0 161 78.3
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.6e-67 260.0 169 73.4
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 2.0e-67 259.6 171 73.7
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 2.7e-67 259.2 166 76.5
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 3.5e-67 258.8 154 79.9
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 4.6e-67 258.5 159 79.2
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 4.6e-67 258.5 167 76.6
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.0e-66 257.3 154 79.2
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 1.3e-66 256.9 172 72.7
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 2.3e-66 256.1 199 65.8
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 2.3e-66 256.1 161 77.0
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 3.0e-66 255.8 193 67.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 3.9e-66 255.4 194 67.5
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 3.9e-66 255.4 192 68.2
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 5.0e-66 255.0 156 78.2
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 6.6e-66 254.6 154 77.9
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 8.6e-66 254.2 158 77.8
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.1e-65 253.8 153 76.5
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.1e-65 253.8 149 81.2
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 3.3e-65 252.3 160 75.6
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 4.3e-65 251.9 162 75.3
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 9.5e-65 250.8 161 73.9
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.6e-64 250.0 182 70.9
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 2.1e-64 249.6 148 79.7
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 1.1e-63 247.3 156 76.3
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.8e-63 246.5 163 73.6
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 4.0e-63 245.4 163 72.4
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 6.8e-63 244.6 152 77.0
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 8.9e-63 244.2 173 69.4
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.0e-62 243.0 155 76.8
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 2.6e-62 242.7 188 64.4
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 1.7e-61 240.0 158 76.6
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 4.9e-61 238.4 156 76.9
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 4.9e-61 238.4 156 76.9
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 8.3e-61 237.7 158 73.4
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 1.9e-60 236.5 177 67.8
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 5.4e-60 235.0 138 81.2
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 7.0e-60 234.6 148 75.7
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 6.6e-58 228.0 146 72.6
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 2.5e-57 226.1 200 60.5
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 1.2e-56 223.8 232 55.2
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.1e-55 220.7 148 71.6
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.8e-55 219.9 156 66.0
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 8.9e-55 217.6 173 64.2
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 2.0e-54 216.5 145 71.7
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 5.8e-54 214.9 132 77.3
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 9.9e-54 214.2 165 66.1
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 1.3e-53 213.8 174 63.8
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 2.4e-52 209.5 124 79.0
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 9.2e-52 207.6 148 65.5
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.0e-50 204.1 151 66.9
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 6.6e-50 201.4 148 64.2
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 5.2e-47 191.8 170 63.5
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 3.4e-46 189.1 149 63.8
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 1.1e-44 184.1 110 77.3
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 3.2e-44 182.6 160 60.6
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 8.7e-42 174.5 157 59.2
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 5.3e-39 165.2 124 69.4
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 6.9e-39 164.9 115 64.3
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 9.0e-39 164.5 153 58.2
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 4.9e-37 158.7 149 54.4
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 1.9e-36 156.8 162 53.7
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 2.7e-35 152.9 95 78.9
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 5.1e-34 148.7 169 49.7
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.1e-31 141.0 89 76.4
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 6.9e-31 138.3 160 41.9
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 3.4e-30 136.0 149 49.0
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 7.6e-30 134.8 178 47.8
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.7e-29 133.7 79 73.4
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 7.1e-20 101.7 64 68.8
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 3.1e-15 86.3 79 58.2
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 3.9e-10 69.3 42 78.6
SGA_v2.0_scaffold440G51651 Striga asiatica HOM05D007006 ORTHO05D008925 6.3e-08 62.0 215 30.2


User provided reference genes

Program Settings