Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.734 Avicennia marina HOM05D003448 ORTHO05D004028 5.0e-88 327.8 171 100.0
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 1.8e-21 106.7 141 46.1
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 1.2e-20 104.0 138 44.2
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.4e-18 97.1 149 41.6
SalBow2G2818 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.5e-18 96.3 138 45.7
SalBow2G2515 Salvia bowleyana HOM05D003448 ORTHO05D004028 4.2e-18 95.5 138 45.7
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 4.2e-18 95.5 135 45.9
Nitab4.5_0000014g0220 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.2e-17 94.0 142 43.7
Migut.L01240 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.0e-16 90.9 158 38.6
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.0e-16 89.4 140 41.4
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 5.1e-16 88.6 137 42.3
Solyc04g005530.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.1e-15 87.4 142 42.3
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 1.5e-15 87.0 142 42.3
Migut.L01238 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.9e-15 86.7 132 39.4
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 5.7e-15 85.1 135 40.0
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 5.7e-15 85.1 141 41.1
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 7.4e-15 84.7 155 38.1
Migut.L01237 Erythranthe guttata HOM05D003448 ORTHO05D004028 9.6e-15 84.3 150 36.7
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 1.3e-14 84.0 133 42.9
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 1.3e-14 84.0 137 37.2
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 2.8e-14 82.8 129 41.1
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 2.8e-14 82.8 147 39.5
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 2.8e-14 82.8 146 42.5
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 3.7e-14 82.4 154 35.7
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 4.8e-14 82.0 155 42.6
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 6.2e-14 81.6 142 38.7
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 6.2e-14 81.6 146 41.8
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 2.4e-13 79.7 134 38.8
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 3.1e-13 79.3 135 37.0
MD16G1066700 Malus domestica HOM05D003448 ORTHO05D004028 3.1e-13 79.3 150 38.7
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 4.1e-13 79.0 140 38.6
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 5.3e-13 78.6 139 38.1
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 5.3e-13 78.6 150 36.0
Migut.L01239 Erythranthe guttata HOM05D003448 ORTHO05D004028 5.3e-13 78.6 139 40.3
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 1.2e-12 77.4 150 37.3
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 2.0e-12 76.6 137 38.0
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 2.0e-12 76.6 147 40.1
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.4e-12 75.9 141 37.6
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.4e-12 75.9 141 39.0
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 3.4e-12 75.9 141 39.0
SGA_v2.0_scaffold36G14418 Striga asiatica HOM05D003448 ORTHO05D004028 3.4e-12 75.9 136 37.5
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 5.8e-12 75.1 157 36.3
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 5.8e-12 75.1 143 35.0
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 5.8e-12 75.1 142 38.7
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 1.0e-11 74.3 146 36.3
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 1.0e-11 74.3 151 38.4
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 1.3e-11 73.9 151 35.8
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 1.3e-11 73.9 139 37.4
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 1.7e-11 73.6 134 35.8
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 1.7e-11 73.6 149 34.9
SalBow2G2694 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.2e-11 73.2 138 34.8
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 3.8e-11 72.4 154 35.7
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 3.8e-11 72.4 149 36.2
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 5.0e-11 72.0 131 35.9
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 5.0e-11 72.0 140 35.0
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 5.0e-11 72.0 143 35.0
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 6.5e-11 71.6 156 35.3
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 6.5e-11 71.6 137 35.0
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 8.4e-11 71.2 150 38.0
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 8.4e-11 71.2 150 38.0
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 1.1e-10 70.9 151 34.4
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 1.1e-10 70.9 145 35.2
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 1.9e-10 70.1 160 33.8
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.9e-10 70.1 145 35.9
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.9e-10 70.1 145 35.9
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 1.9e-10 70.1 171 31.0
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 1.9e-10 70.1 152 36.8
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 3.2e-10 69.3 134 35.8
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 4.2e-10 68.9 161 34.8
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 4.2e-10 68.9 140 36.4
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 4.2e-10 68.9 145 35.2
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 5.5e-10 68.6 151 35.1
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 7.1e-10 68.2 160 31.2
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 9.3e-10 67.8 135 37.8
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 1.2e-09 67.4 140 34.3
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 1.6e-09 67.0 127 33.1
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 1.6e-09 67.0 151 33.1
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 2.1e-09 66.6 141 34.8
Lsat_1_v5_gn_8_49260 Lactuca sativa HOM05D003448 ORTHO05D004028 2.7e-09 66.2 151 33.8
AT3G11810 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 4.6e-09 65.5 172 36.0
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 4.6e-09 65.5 155 31.0
Psat7g153440 Pisum sativum HOM05D003448 ORTHO05D004028 4.6e-09 65.5 149 28.9
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 6.1e-09 65.1 161 34.2
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 6.1e-09 65.1 143 35.0
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 7.9e-09 64.7 125 36.8
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 7.9e-09 64.7 160 32.5
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 1.0e-08 64.3 161 34.2
Carub.0005s0231 Capsella rubella HOM05D003448 ORTHO05D004028 1.0e-08 64.3 160 35.0
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 1.3e-08 63.9 146 29.5
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 1.3e-08 63.9 146 29.5
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 1.3e-08 63.9 146 29.5
Glyma.07G227750 Glycine max HOM05D003448 ORTHO05D004028 1.3e-08 63.9 130 34.6
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.8e-08 63.5 156 32.7
TPR.G38090 Trifolium pratense HOM05D003448 ORTHO05D004028 1.8e-08 63.5 139 31.7
Lalb_Chr05g0220171 Lupinus albus HOM05D003448 ORTHO05D004028 2.3e-08 63.2 120 38.3
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 3.9e-08 62.4 134 35.1
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.9e-08 62.4 150 32.7
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea HOM05D003448 ORTHO05D004028 5.1e-08 62.0 134 36.6
Lalb_Chr09g0329141 Lupinus albus HOM05D003448 ORTHO05D004028 5.1e-08 62.0 133 33.8
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 8.7e-08 61.2 138 31.9
Phvul.002G103700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 8.7e-08 61.2 151 35.1
TPR.G36791 Trifolium pratense HOM05D003448 ORTHO05D004028 8.7e-08 61.2 139 29.5
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 1.1e-07 60.8 138 35.5
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.1e-07 60.8 147 32.0
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 1.1e-07 60.8 167 31.7
Nitab4.5_0000391g0130 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.9e-07 60.1 151 31.8
TPR.G11298 Trifolium pratense HOM05D003448 ORTHO05D004028 2.5e-07 59.7 132 28.8
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 3.3e-07 59.3 156 33.3
THA.LOC104824071 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 3.3e-07 59.3 150 31.3
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 4.3e-07 58.9 140 31.4
HanXRQChr12g0362021 Helianthus annuus HOM05D003448 ORTHO05D004028 9.7e-07 57.8 136 30.9
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 1.3e-06 57.4 137 34.3
Medtr4g082355 Medicago truncatula HOM05D003448 ORTHO05D004028 1.3e-06 57.4 130 29.2
SEGI_06194 Sequoiadendron giganteum HOM05D003448 ORTHO05D004028 1.6e-06 57.0 140 32.1
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 2.2e-06 56.6 161 30.4
COL.COLO4_27959 Corchorus olitorius HOM05D003448 ORTHO05D004028 2.8e-06 56.2 131 34.4
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.7e-06 55.8 144 32.6
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 4.8e-06 55.5 134 29.9
Peaxi162Scf00187g00126 Petunia axillaris HOM05D003448 ORTHO05D004028 8.2e-06 54.7 154 33.8
Solyc05g012860.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 8.2e-06 54.7 130 32.3


User provided reference genes

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