Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 8.8e-198 693.3 333 100.0
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 4.3e-176 621.3 335 87.8
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 6.2e-175 617.5 333 85.9
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 4.0e-174 614.8 333 85.9
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.4e-173 611.3 333 86.5
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 4.4e-173 611.3 333 85.9
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.8e-173 610.9 334 86.2
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.9e-172 607.8 332 85.8
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.4e-171 606.3 333 86.2
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.9e-171 605.9 336 85.7
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 5.4e-171 604.4 321 86.3
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 7.0e-171 604.0 325 86.8
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 7.0e-171 604.0 334 85.3
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 1.6e-170 602.8 334 85.3
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.3e-169 599.7 324 86.4
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 1.3e-169 599.7 334 84.7
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 2.3e-169 599.0 337 85.2
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 3.3e-168 595.1 318 87.7
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 5.6e-168 594.3 325 85.2
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 7.3e-168 594.0 319 86.5
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.6e-167 592.8 321 85.7
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.1e-166 590.1 333 84.1
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.4e-166 589.7 317 86.4
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.8e-166 589.3 315 85.7
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 8.9e-166 587.0 325 84.3
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 8.9e-166 587.0 328 84.1
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 2.0e-165 585.9 313 86.6
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 2.6e-165 585.5 325 84.6
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 3.4e-165 585.1 323 84.8
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 5.8e-165 584.3 326 83.4
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 5.8e-165 584.3 327 84.1
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 7.5e-165 583.9 329 83.3
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 9.9e-165 583.6 326 83.4
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 9.9e-165 583.6 326 82.8
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 1.3e-164 583.2 323 83.3
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.2e-164 582.4 320 84.7
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 2.9e-164 582.0 325 84.3
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 3.7e-164 581.6 323 83.0
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 3.7e-164 581.6 323 83.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 8.3e-164 580.5 319 83.7
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 1.1e-163 580.1 313 85.6
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.1e-163 580.1 316 84.2
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.9e-163 579.3 328 83.2
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 2.4e-163 578.9 328 82.9
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.4e-163 578.9 319 83.7
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.4e-163 578.9 316 85.1
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 2.4e-163 578.9 313 87.2
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 5.4e-163 577.8 314 84.7
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 5.4e-163 577.8 325 83.1
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 5.4e-163 577.8 325 83.1
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 5.4e-163 577.8 312 85.6
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 7.1e-163 577.4 319 84.0
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 7.1e-163 577.4 326 81.9
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 3.5e-162 575.1 322 84.2
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.6e-162 574.7 327 82.6
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 4.6e-162 574.7 322 82.6
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 1.0e-161 573.5 327 81.7
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.3e-161 573.2 327 82.0
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.3e-161 573.2 335 81.2
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 3.0e-161 572.0 319 83.4
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 3.0e-161 572.0 311 84.9
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 6.6e-161 570.9 335 81.8
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 8.6e-161 570.5 333 81.1
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.1e-160 570.1 315 84.4
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 2.5e-160 568.9 333 80.5
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 2.5e-160 568.9 333 78.7
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 3.3e-160 568.5 323 80.5
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 9.5e-160 567.0 316 81.6
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.6e-159 566.2 313 84.0
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.6e-159 565.1 313 83.7
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 8.1e-159 563.9 317 81.7
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.8e-158 562.8 313 83.7
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 2.4e-158 562.4 319 80.6
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 3.1e-158 562.0 313 82.7
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 3.1e-158 562.0 316 82.9
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 4.0e-158 561.6 325 82.5
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 5.2e-158 561.2 320 80.9
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 6.8e-158 560.8 336 79.2
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 8.9e-158 560.5 375 72.5
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 1.2e-157 560.1 321 81.6
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 2.6e-157 558.9 336 78.9
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 2.6e-157 558.9 336 78.9
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 2.6e-157 558.9 328 80.5
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 5.8e-157 557.8 328 79.9
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.3e-156 556.6 329 79.3
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 1.3e-156 556.6 302 85.4
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.3e-156 556.6 325 80.3
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 2.9e-156 555.4 330 79.4
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 2.9e-156 555.4 330 79.4
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 3.8e-156 555.1 317 81.7
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 1.4e-155 553.1 310 81.9
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 1.9e-155 552.7 336 78.0
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 1.9e-155 552.7 336 78.0
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 4.2e-155 551.6 329 78.7
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 2.7e-154 548.9 318 78.6
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 3.5e-154 548.5 325 80.3
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 5.1e-153 544.7 321 78.2
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.1e-152 543.5 318 79.2
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.5e-152 543.1 329 78.1
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 3.3e-152 542.0 315 79.7
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 3.6e-151 538.5 298 84.2
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 1.8e-150 536.2 317 78.5
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 5.8e-149 531.2 327 75.8
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 1.7e-148 529.6 327 75.5
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 7.1e-147 524.2 335 74.3
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.0e-145 520.4 316 78.8
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.3e-145 519.2 322 73.9
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.1e-144 516.9 278 85.6
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 3.6e-143 511.9 302 77.5
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 4.8e-143 511.5 314 74.8
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 8.1e-143 510.8 319 74.3
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 2.0e-141 506.1 275 86.2
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 9.3e-139 497.3 279 82.4
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 3.7e-135 485.3 321 69.5
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.5e-128 462.6 314 66.6
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 2.5e-128 462.6 314 66.6
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 7.4e-128 461.1 304 69.7
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 3.7e-127 458.8 307 67.1
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 8.2e-127 457.6 251 82.5
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 3.1e-126 455.7 332 68.1
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 2.0e-117 426.4 228 87.3
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 3.2e-115 419.1 306 61.1
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 1.0e-105 387.5 329 57.4
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 7.7e-101 371.3 246 70.7
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 2.8e-95 352.8 215 76.3
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 2.0e-88 330.1 314 51.3
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 5.4e-78 295.4 350 42.3
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 9.2e-70 268.1 360 40.0
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 6.4e-55 218.8 123 79.7
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 6.9e-33 145.6 82 86.6
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 2.1e-29 134.0 89 74.2
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.5e-21 106.7 80 68.8
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 6.2e-18 95.9 68 66.2
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 1.4e-14 84.7 68 63.2
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 9.3e-14 82.0 47 78.7
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 3.5e-13 80.1 51 68.6
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 3.9e-12 76.6 41 80.5
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.1e-06 58.5 42 57.1


User provided reference genes

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