Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 1.1e-195 686.4 349 100.0
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 3.0e-148 528.9 351 77.2
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 8.8e-148 527.3 351 76.9
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 4.5e-136 488.4 328 77.4
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 6.5e-135 484.6 350 74.3
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 7.2e-134 481.1 403 64.8
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 1.0e-132 477.2 350 70.9
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 2.5e-126 456.1 304 77.0
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 5.5e-126 454.9 313 75.7
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 3.6e-125 452.2 304 76.3
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 1.4e-124 450.3 350 68.0
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 2.3e-124 449.5 304 76.6
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 1.2e-123 447.2 352 68.2
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 9.8e-123 444.1 312 72.4
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 9.8e-123 444.1 350 66.3
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 3.7e-122 442.2 350 67.7
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 3.7e-122 442.2 350 66.3
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.4e-121 440.3 350 67.4
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.8e-121 439.9 350 67.1
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 1.8e-121 439.9 351 67.0
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 4.1e-121 438.7 354 65.8
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 5.4e-121 438.3 305 72.1
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 5.4e-121 438.3 350 66.6
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 5.4e-121 438.3 304 72.7
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 7.0e-121 438.0 351 65.2
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.6e-120 436.8 350 66.0
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 1.6e-120 436.8 354 65.3
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 1.6e-120 436.8 350 64.0
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 4.5e-120 435.3 302 72.5
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 4.5e-120 435.3 304 72.7
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 5.9e-120 434.9 352 64.2
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 5.9e-120 434.9 299 73.2
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 5.9e-120 434.9 302 72.5
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 7.8e-120 434.5 304 72.0
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 1.0e-119 434.1 352 64.5
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 1.3e-119 433.7 310 70.0
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 1.3e-119 433.7 317 69.7
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 1.3e-119 433.7 304 72.4
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 1.7e-119 433.3 314 71.0
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 1.7e-119 433.3 301 73.1
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 3.8e-119 432.2 300 71.7
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 3.8e-119 432.2 313 71.6
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 6.6e-119 431.4 299 71.2
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 8.6e-119 431.0 265 81.5
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 1.1e-118 430.6 280 75.7
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 1.1e-118 430.6 319 69.3
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.5e-118 430.3 350 65.7
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 1.5e-118 430.3 299 72.6
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 1.5e-118 430.3 345 64.9
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 1.9e-118 429.9 323 68.1
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 2.5e-118 429.5 304 70.4
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 2.5e-118 429.5 284 75.0
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 2.5e-118 429.5 319 69.0
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 3.3e-118 429.1 306 70.9
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 4.3e-118 428.7 351 63.5
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 4.3e-118 428.7 320 69.1
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 5.6e-118 428.3 350 64.0
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 5.6e-118 428.3 299 72.2
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 7.3e-118 427.9 363 63.6
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 7.3e-118 427.9 351 63.5
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 9.5e-118 427.6 272 78.7
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 1.2e-117 427.2 305 72.8
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 1.2e-117 427.2 284 74.3
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 1.6e-117 426.8 350 64.3
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 1.6e-117 426.8 304 72.0
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 1.6e-117 426.8 317 69.7
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 2.1e-117 426.4 319 68.7
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 3.6e-117 425.6 352 65.1
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 4.7e-117 425.2 274 76.3
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 6.1e-117 424.9 298 71.8
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 8.0e-117 424.5 355 61.7
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 1.0e-116 424.1 325 66.5
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.4e-116 423.7 319 68.0
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 1.4e-116 423.7 320 67.8
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 1.4e-116 423.7 305 70.8
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 1.4e-116 423.7 365 62.7
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 1.4e-116 423.7 320 69.1
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 1.8e-116 423.3 309 69.9
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 1.8e-116 423.3 286 74.5
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 3.0e-116 422.5 354 62.7
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 5.2e-116 421.8 350 63.7
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 6.8e-116 421.4 272 76.1
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 6.8e-116 421.4 327 67.6
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 6.8e-116 421.4 309 69.6
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.2e-115 420.6 302 71.2
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 1.2e-115 420.6 278 75.2
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 1.2e-115 420.6 321 67.0
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 1.2e-115 420.6 313 69.6
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.5e-115 420.2 297 71.4
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 2.0e-115 419.9 300 71.3
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 2.6e-115 419.5 336 65.5
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 4.4e-115 418.7 305 71.8
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 7.5e-115 417.9 313 68.1
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 1.3e-114 417.2 296 71.3
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 2.2e-114 416.4 314 67.5
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 2.2e-114 416.4 299 71.6
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 2.9e-114 416.0 284 71.1
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 3.7e-114 415.6 330 65.8
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 3.7e-114 415.6 314 67.2
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 3.7e-114 415.6 314 67.5
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 3.7e-114 415.6 314 67.5
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 3.7e-114 415.6 313 67.7
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 6.4e-114 414.8 274 74.1
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 6.4e-114 414.8 330 66.1
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 8.3e-114 414.5 314 67.2
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 8.3e-114 414.5 314 67.5
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 1.8e-113 413.3 330 66.1
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 2.4e-113 412.9 305 68.9
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 3.2e-113 412.5 323 66.3
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 4.1e-113 412.1 319 66.8
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 7.0e-113 411.4 324 65.7
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 7.0e-113 411.4 279 73.8
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 9.2e-113 411.0 317 67.5
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 9.2e-113 411.0 314 68.2
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 1.6e-112 410.2 290 69.7
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 3.5e-112 409.1 279 73.5
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 4.6e-112 408.7 323 66.3
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 4.6e-112 408.7 281 73.0
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 5.9e-112 408.3 309 66.7
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 7.8e-112 407.9 333 64.9
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 1.9e-110 403.3 338 61.8
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 4.3e-110 402.1 327 64.8
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 1.2e-109 400.6 275 71.3
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.1e-109 399.8 289 69.6
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 2.8e-109 399.4 304 66.4
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 3.6e-109 399.1 361 62.0
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 2.6e-107 392.9 300 67.3
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 4.4e-107 392.1 290 68.3
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 2.2e-106 389.8 281 68.3
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 2.4e-105 386.3 319 63.3
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 3.5e-104 382.5 317 64.4
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 8.6e-103 377.9 346 56.9
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 5.6e-102 375.2 299 64.9
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 6.2e-101 371.7 291 62.5
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 4.4e-99 365.5 252 74.6
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.8e-99 365.2 314 62.4
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 1.3e-98 364.0 275 65.1
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 2.9e-98 362.8 312 62.2
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 8.6e-95 351.3 283 62.9
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 1.7e-90 337.0 279 58.8
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 2.8e-85 319.7 186 87.6
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 9.0e-84 314.7 262 64.9
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 1.3e-82 310.8 224 72.3
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 8.4e-82 308.1 307 53.4
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 7.8e-80 301.6 274 53.6
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 1.7e-79 300.4 309 51.8
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 4.0e-76 289.3 292 54.8
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 1.2e-72 277.7 241 61.0
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 2.3e-63 246.9 218 65.1
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.5e-62 244.2 239 60.7
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 1.5e-62 244.2 173 78.0
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 8.2e-53 211.8 220 58.2
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.0e-51 207.2 312 43.6
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.9e-49 200.7 175 61.7
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 5.5e-49 199.1 168 57.7
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 9.3e-49 198.4 286 44.4
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 8.7e-47 191.8 174 58.0
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 2.1e-40 170.6 185 53.0
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.7e-37 161.0 137 57.7
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 6.5e-34 149.1 279 32.6
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 1.0e-31 141.7 90 78.9
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 1.2e-27 128.3 76 80.3
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.7e-26 124.4 163 43.6
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 3.2e-25 120.2 75 78.7
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 2.1e-24 117.5 67 88.1
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 1.2e-22 111.7 146 47.3
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 3.7e-21 106.7 89 60.7
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.0e-18 98.6 83 56.6
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 1.7e-18 97.8 66 78.8
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 1.0e-10 72.0 181 30.4
CAN.G1019.1 Capsicum annuum HOM05D004037 ORTHO05D004744 5.5e-09 66.2 59 52.5
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 8.0e-08 62.4 81 43.2


User provided reference genes

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