Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 2.0e-116 422.5 226 100.0
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 5.1e-40 168.7 230 52.6
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.7e-35 153.7 231 51.1
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 1.0e-32 144.4 216 47.2
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 1.0e-32 144.4 216 47.2
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 5.7e-31 138.7 275 40.4
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.6e-28 129.8 230 42.6
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 2.3e-24 116.7 229 38.4
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.1e-23 114.4 242 38.0
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 1.1e-23 114.4 213 39.9
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 9.7e-23 111.3 227 37.9
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 2.2e-22 110.2 226 38.9
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 4.1e-21 105.9 242 37.2
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.2e-20 104.4 236 36.0
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 7.7e-20 101.7 254 37.4
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.9e-18 97.1 230 37.4
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 7.2e-18 95.1 236 37.7
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 7.2e-18 95.1 228 36.4
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.6e-17 92.8 227 34.4
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 6.1e-17 92.0 227 36.6
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 8.0e-17 91.7 233 34.3
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.8e-16 90.5 227 37.0
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 2.3e-16 90.1 246 34.1
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 3.0e-16 89.7 218 37.6
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 4.0e-16 89.4 225 35.6
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 5.2e-16 89.0 226 38.1
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.5e-15 87.4 222 34.2
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 2.0e-15 87.0 225 35.1
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.6e-15 86.7 226 33.6
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.6e-15 86.7 168 39.9
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 4.4e-15 85.9 232 37.1
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 4.8e-14 82.4 230 33.0
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.8e-14 82.4 234 35.9
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 6.3e-14 82.0 240 35.4
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 6.3e-14 82.0 227 33.9
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 8.3e-14 81.6 222 36.5
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 8.3e-14 81.6 228 34.6
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.4e-13 80.9 247 34.0
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 4.1e-13 79.3 230 33.9
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 4.1e-13 79.3 231 32.9
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 5.4e-13 79.0 240 32.9
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.6e-12 77.4 231 34.2
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.0e-12 77.0 221 32.1
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.0e-12 77.0 144 38.2
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 2.7e-12 76.6 229 33.6
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 3.5e-12 76.3 227 35.7
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.9e-12 75.5 221 31.7
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 5.9e-12 75.5 246 32.5
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 5.9e-12 75.5 232 32.8
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 7.7e-12 75.1 220 31.8
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 5.0e-11 72.4 229 30.1
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 8.5e-11 71.6 222 32.0
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.5e-10 70.9 207 33.3
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.2e-10 69.7 232 31.9
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 3.2e-10 69.7 245 32.7
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 7.2e-10 68.6 221 31.7
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 9.4e-10 68.2 246 29.3
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 1.2e-09 67.8 90 46.7
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 3.6e-09 66.2 230 30.4
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 4.7e-09 65.9 224 33.0
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 8.0e-09 65.1 234 30.8
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 1.8e-08 63.9 239 31.0
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 4.0e-08 62.8 227 31.7
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 4.0e-08 62.8 229 30.6
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 4.0e-08 62.8 223 29.1
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.8e-08 61.6 222 31.1
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 2.0e-07 60.5 110 39.1
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 2.6e-07 60.1 223 31.8
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 7.5e-07 58.5 221 33.0
MBI07_g27870_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.3e-06 57.8 66 47.0
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 1.3e-06 57.8 218 30.7
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 2.2e-06 57.0 176 33.5


User provided reference genes

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