Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7107 Avicennia marina HOM05D000184 ORTHO05D000032 2.0e-81 305.8 172 100.0
SalBow8G2349 Salvia bowleyana HOM05D000184 ORTHO05D000032 1.3e-43 180.3 200 63.0
CSS0008911 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 3.8e-35 152.1 206 58.3
Migut.H01641 Erythranthe guttata HOM05D000184 ORTHO05D000032 1.1e-34 150.6 199 55.8
MSTRG.14580 Avicennia marina HOM05D000184 ORTHO05D000032 2.5e-34 149.4 204 56.4
MSTRG.16075 Avicennia marina HOM05D000184 ORTHO05D000032 9.3e-34 147.5 182 58.2
Dinv14849 Davidia involucrata HOM05D000184 ORTHO05D000032 1.2e-33 147.1 205 56.1
Dinv04379 Davidia involucrata HOM05D000184 ORTHO05D000032 3.0e-32 142.5 202 55.9
Migut.M01479 Erythranthe guttata HOM05D000184 ORTHO05D000032 5.1e-32 141.7 210 55.7
Sabra06G0001000 Salix brachista HOM05D000184 ORTHO05D000032 6.7e-32 141.4 200 47.0
Rhsim13G0138100 Rhododendron simsii HOM05D000184 ORTHO05D000032 9.7e-31 137.5 203 55.7
Oeu031377.1 Olea europaea HOM05D000184 ORTHO05D000032 2.8e-30 136.0 204 52.9
Thecc.06G244300 Theobroma cacao HOM05D000184 ORTHO05D000032 4.8e-30 135.2 201 55.7
CAN.G308.47 Capsicum annuum HOM05D000184 ORTHO05D000032 6.3e-30 134.8 205 52.7
Haze_07061 Corylus avellana HOM05D000184 ORTHO05D000032 6.3e-30 134.8 205 45.9
vmacro03585 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 8.2e-30 134.4 203 54.7
Potri.016G001100 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.4e-29 132.9 196 57.1
Potri.006G000800 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.5e-28 130.2 204 54.4
Atru.chr1.2208 Acer truncatum HOM05D000184 ORTHO05D000032 2.6e-28 129.4 197 56.9
Duzib192G0478 Durio zibethinus HOM05D000184 ORTHO05D000032 3.4e-28 129.0 205 54.1
Ciclev10015893m.g Citrus clementina HOM05D000184 ORTHO05D000032 5.9e-28 128.3 197 54.3
Duzib160G0600 Durio zibethinus HOM05D000184 ORTHO05D000032 7.6e-28 127.9 200 53.0
Manes.09G072838 Manihot esculenta HOM05D000184 ORTHO05D000032 1.0e-27 127.5 204 52.9
TWI63G0683 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 1.0e-27 127.5 201 52.2
Cfa021530 Carpinus fangiana HOM05D000184 ORTHO05D000032 1.3e-27 127.1 215 43.3
COL.COLO4_31962 Corchorus olitorius HOM05D000184 ORTHO05D000032 2.2e-27 126.3 205 53.7
Hma1.2p1_0394F.1_g143420 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 2.2e-27 126.3 199 55.3
TAR627G0260 Trochodendron aralioides HOM05D000184 ORTHO05D000032 8.5e-27 124.4 207 51.7
Manes.08G014900 Manihot esculenta HOM05D000184 ORTHO05D000032 1.1e-26 124.0 200 52.5
QL05p066208 Quercus lobata HOM05D000184 ORTHO05D000032 1.9e-26 123.2 202 45.5
Peaxi162Scf00798g00318 Petunia axillaris HOM05D000184 ORTHO05D000032 2.5e-26 122.9 183 55.2
Nitab4.5_0008054g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 5.5e-26 121.7 201 50.7
Sabra16G0007600 Salix brachista HOM05D000184 ORTHO05D000032 5.5e-26 121.7 164 50.0
SalBow1G0561 Salvia bowleyana HOM05D000184 ORTHO05D000032 7.2e-26 121.3 154 62.3
SalBow1G6017 Salvia bowleyana HOM05D000184 ORTHO05D000032 7.2e-26 121.3 154 62.3
Cpa.g.sc27.185 Carica papaya HOM05D000184 ORTHO05D000032 2.1e-25 119.8 240 37.9
Rhsim02G0087800 Rhododendron simsii HOM05D000184 ORTHO05D000032 3.6e-25 119.0 183 56.8
PGSC0003DMG400007401 Solanum tuberosum HOM05D000184 ORTHO05D000032 3.6e-25 119.0 197 51.8
Peaxi162Scf00154g00019 Petunia axillaris HOM05D000184 ORTHO05D000032 6.1e-25 118.2 201 49.8
TAR629G3073 Trochodendron aralioides HOM05D000184 ORTHO05D000032 7.9e-25 117.9 201 52.2
MD10G1342100 Malus domestica HOM05D000184 ORTHO05D000032 1.3e-24 117.1 205 52.7
Prupe.4G000700 Prunus persica HOM05D000184 ORTHO05D000032 1.8e-24 116.7 205 51.7
Glyma.09G017400 Glycine max HOM05D000184 ORTHO05D000032 2.3e-24 116.3 198 53.0
MD05G1364400 Malus domestica HOM05D000184 ORTHO05D000032 2.3e-24 116.3 205 51.2
Sopen11g026970 Solanum pennellii HOM05D000184 ORTHO05D000032 3.0e-24 115.9 199 50.3
CiPaw.10G084900 Carya illinoinensis HOM05D000184 ORTHO05D000032 3.9e-24 115.5 204 50.5
CiPaw.09G113000 Carya illinoinensis HOM05D000184 ORTHO05D000032 1.9e-23 113.2 154 60.4
Nitab4.5_0006133g0010 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.9e-23 113.2 194 50.0
Glyma.15G123100 Glycine max HOM05D000184 ORTHO05D000032 5.7e-23 111.7 198 52.0
Ca_24685_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 1.3e-22 110.5 199 49.2
vmacro15708 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 2.2e-22 109.8 201 48.8
Gohir.A06G202500 Gossypium hirsutum HOM05D000184 ORTHO05D000032 4.8e-22 108.6 200 51.0
Gohir.D06G219200 Gossypium hirsutum HOM05D000184 ORTHO05D000032 6.3e-22 108.2 201 51.7
Actinidia34745 Actinidia chinensis HOM05D000184 ORTHO05D000032 8.2e-22 107.8 205 47.8
Solyc11g067280.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 1.1e-21 107.5 197 47.7
ClCG01G021020 Citrullus lanatus HOM05D000184 ORTHO05D000032 3.1e-21 105.9 197 50.8
Medtr2g027860 Medicago truncatula HOM05D000184 ORTHO05D000032 6.9e-21 104.8 200 50.5
Nitab4.5_0001534g0020 Nicotiana tabacum HOM05D000184 ORTHO05D000032 9.1e-21 104.4 207 48.8
Lj6g0021259 Lotus japonicus HOM05D000184 ORTHO05D000032 1.2e-20 104.0 203 50.7
Nitab4.5_0002948g0070 Nicotiana tabacum HOM05D000184 ORTHO05D000032 1.2e-20 104.0 207 49.8
Eucgr.E04232 Eucalyptus grandis HOM05D000184 ORTHO05D000032 3.4e-20 102.4 204 47.5
PGSC0003DMG400008786 Solanum tuberosum HOM05D000184 ORTHO05D000032 5.9e-20 101.7 193 47.7
SGA_v2.0_scaffold7G03653 Striga asiatica HOM05D000184 ORTHO05D000032 1.7e-19 100.1 194 50.5
VMungo0540G1492 Vigna mungo HOM05D000184 ORTHO05D000032 1.7e-19 100.1 196 48.0
arahy.Tifrunner.gnm1.ann1.V4D1J0 Arachis hypogaea HOM05D000184 ORTHO05D000032 2.2e-19 99.8 196 46.9
CiPaw.05G165400 Carya illinoinensis HOM05D000184 ORTHO05D000032 1.1e-18 97.4 132 58.3
THA.LOC104827566 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 1.1e-18 97.4 196 48.0
Hma1.2p1_0391F.1_g142810 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 3.2e-18 95.9 199 48.7
arahy.Tifrunner.gnm1.ann1.7QB8XJ Arachis hypogaea HOM05D000184 ORTHO05D000032 4.2e-18 95.5 196 46.4
Oeu017920.3 Olea europaea HOM05D000184 ORTHO05D000032 7.2e-18 94.7 140 45.7
Lalb_Chr18g0057561 Lupinus albus HOM05D000184 ORTHO05D000032 1.6e-17 93.6 198 50.0
Nn1g08293 Nelumbo nucifera HOM05D000184 ORTHO05D000032 1.6e-17 93.6 149 56.4
TAR626G0613 Trochodendron aralioides HOM05D000184 ORTHO05D000032 1.6e-17 93.6 205 46.3
Gorai.010G247100 Gossypium raimondii HOM05D000184 ORTHO05D000032 2.1e-17 93.2 167 44.9
Lalb_Chr20g0119711 Lupinus albus HOM05D000184 ORTHO05D000032 2.7e-17 92.8 177 52.0
RcHm_v2.0_Chr5g0000071 Rosa chinensis HOM05D000184 ORTHO05D000032 3.6e-17 92.4 204 38.7
Sopen11g011510 Solanum pennellii HOM05D000184 ORTHO05D000032 7.9e-17 91.3 193 46.1
FvH4_3g00070 Fragaria vesca HOM05D000184 ORTHO05D000032 1.4e-16 90.5 205 46.8
Psat1g171360 Pisum sativum HOM05D000184 ORTHO05D000032 3.9e-16 89.0 200 45.5
PSO063G1300 Papaver somniferum HOM05D000184 ORTHO05D000032 5.1e-16 88.6 176 48.9
PGR004G0480 Punica granatum HOM05D000184 ORTHO05D000032 6.7e-16 88.2 141 56.0
Sed0027716 Sechium edule HOM05D000184 ORTHO05D000032 6.7e-16 88.2 196 45.9
arahy.Tifrunner.gnm1.ann1.GS51BL Arachis hypogaea HOM05D000184 ORTHO05D000032 1.1e-15 87.4 189 48.1
Phvul.006G134700 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 1.1e-15 87.4 193 44.6
THA.LOC104802358 Tarenaya hassleriana HOM05D000184 ORTHO05D000032 1.1e-15 87.4 205 44.4
Gorai.003G074000 Gossypium raimondii HOM05D000184 ORTHO05D000032 4.4e-15 85.5 181 42.0
arahy.Tifrunner.gnm1.ann1.WDM4XI Arachis hypogaea HOM05D000184 ORTHO05D000032 7.4e-15 84.7 155 54.2
Nn1g07651 Nelumbo nucifera HOM05D000184 ORTHO05D000032 9.7e-15 84.3 200 47.5
unitig_37.g12193 Utricularia gibba HOM05D000184 ORTHO05D000032 2.2e-14 83.2 142 54.2
Aa31LG2G8820 Aethionema arabicum HOM05D000184 ORTHO05D000032 2.8e-14 82.8 198 46.0
MELO3C007988.2 Cucumis melo HOM05D000184 ORTHO05D000032 2.8e-14 82.8 155 53.5
Lj4g0013382 Lotus japonicus HOM05D000184 ORTHO05D000032 6.3e-14 81.6 100 69.0
Eucgr.D00972 Eucalyptus grandis HOM05D000184 ORTHO05D000032 1.1e-13 80.9 155 51.6
ECA234G1161 Erigeron canadensis HOM05D000184 ORTHO05D000032 4.1e-13 79.0 183 47.0
Lj2A254G95 Lonicera japonica HOM05D000184 ORTHO05D000032 1.2e-12 77.4 98 72.4
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.5e-12 77.0 166 41.0
Oeu025982.1 Olea europaea HOM05D000184 ORTHO05D000032 1.5e-12 77.0 183 46.4
Sp2g12530 Schrenkiella parvula HOM05D000184 ORTHO05D000032 7.7e-12 74.7 106 66.0
Aqoxy7G03259 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 1.0e-11 74.3 188 44.7
A02p31630 Brassica napus HOM05D000184 ORTHO05D000032 1.0e-11 74.3 106 65.1
C02p48970 Brassica napus HOM05D000184 ORTHO05D000032 1.0e-11 74.3 106 65.1
BolC2t10991H Brassica oleracea HOM05D000184 ORTHO05D000032 1.0e-11 74.3 106 65.1
Actinidia38943 Actinidia chinensis HOM05D000184 ORTHO05D000032 1.3e-11 73.9 204 42.6
Thhalv10000981m.g Eutrema salsugineum HOM05D000184 ORTHO05D000032 1.3e-11 73.9 205 43.4
BraA02t08166Z Brassica rapa HOM05D000184 ORTHO05D000032 1.7e-11 73.6 106 65.1
Carub.0005s0004 Capsella rubella HOM05D000184 ORTHO05D000032 1.7e-11 73.6 201 43.3
Os09g0299200 Oryza sativa ssp. japonica HOM05D000184 ORTHO05D000032 1.7e-11 73.6 146 52.7
Actinidia28953 Actinidia chinensis HOM05D000184 ORTHO05D000032 8.5e-11 71.2 65 63.1
BcaC06g34222 Brassica carinata HOM05D000184 ORTHO05D000032 8.5e-11 71.2 104 62.5
A06p44710 Brassica napus HOM05D000184 ORTHO05D000032 8.5e-11 71.2 104 62.5
C07p31500 Brassica napus HOM05D000184 ORTHO05D000032 8.5e-11 71.2 104 62.5
BolC7t43692H Brassica oleracea HOM05D000184 ORTHO05D000032 8.5e-11 71.2 104 62.5
BraA06t27344Z Brassica rapa HOM05D000184 ORTHO05D000032 8.5e-11 71.2 104 62.5
CsaV3_6G048010 Cucumis sativus L. HOM05D000184 ORTHO05D000032 1.4e-10 70.5 100 66.0
AT2G01060 Arabidopsis thaliana HOM05D000184 ORTHO05D000032 2.5e-10 69.7 201 43.8
Actinidia26623 Actinidia chinensis HOM05D000184 ORTHO05D000032 3.2e-10 69.3 73 53.4
AL5G10010 Arabidopsis lyrata HOM05D000184 ORTHO05D000032 5.5e-10 68.6 201 43.3
ATR0751G175 Amborella trichopoda HOM05D000184 ORTHO05D000032 9.4e-10 67.8 96 66.7
EL10Ac8g20277 Beta vulgaris HOM05D000184 ORTHO05D000032 9.4e-10 67.8 103 49.5
BcaC06g31336 Brassica carinata HOM05D000184 ORTHO05D000032 9.4e-10 67.8 104 61.5
SGA_v2.0_scaffold49G18216 Striga asiatica HOM05D000184 ORTHO05D000032 1.6e-09 67.0 154 53.2
Ah.09g233790 Amaranthus hybridus HOM05D000184 ORTHO05D000032 2.7e-09 66.2 102 50.0
Solyc11g022470.2 Solanum lycopersicum HOM05D000184 ORTHO05D000032 6.1e-09 65.1 193 39.9
Actinidia04551 Actinidia chinensis HOM05D000184 ORTHO05D000032 8.0e-09 64.7 97 61.9
Cc10_g10050 Coffea canephora HOM05D000184 ORTHO05D000032 8.0e-09 64.7 159 44.7
CARHR143610 Cardamine hirsuta HOM05D000184 ORTHO05D000032 6.7e-08 61.6 197 43.7
AUR62015190 Chenopodium quinoa HOM05D000184 ORTHO05D000032 6.7e-08 61.6 101 46.5
AUR62021801 Chenopodium quinoa HOM05D000184 ORTHO05D000032 6.7e-08 61.6 101 46.5
unitig_32.g11066 Utricularia gibba HOM05D000184 ORTHO05D000032 6.7e-08 61.6 144 48.6
BcaB07g30758 Brassica carinata HOM05D000184 ORTHO05D000032 8.8e-08 61.2 197 41.1
HanXRQChr17g0558531 Helianthus annuus HOM05D000184 ORTHO05D000032 1.5e-07 60.5 174 43.7
HPP92_019689 Vanilla planifolia HOM05D000184 ORTHO05D000032 1.5e-07 60.5 134 55.2
PGR042G2757 Punica granatum HOM05D000184 ORTHO05D000032 3.3e-07 59.3 152 44.7
Os06g0609500 Oryza sativa ssp. japonica HOM05D000184 ORTHO05D000032 1.3e-06 57.4 141 49.6


User provided reference genes

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