Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.2e-83 313.2 157 100.0
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 5.7e-46 188.0 166 62.7
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.7e-45 186.4 166 62.0
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.4e-44 183.3 167 59.3
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.0e-42 177.2 167 58.7
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 6.1e-40 167.9 157 58.6
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 6.1e-40 167.9 157 58.6
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.0e-39 165.6 165 53.3
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.2e-39 164.9 165 54.5
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.0e-38 162.9 163 52.8
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 3.3e-38 162.2 163 54.6
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 9.7e-38 160.6 164 51.2
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 2.2e-37 159.5 165 52.7
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.1e-36 157.1 165 49.7
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.8e-36 156.4 153 55.6
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 3.1e-36 155.6 156 54.5
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.2e-35 153.7 162 50.0
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 2.0e-35 152.9 167 51.5
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 2.6e-35 152.5 165 49.7
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 1.3e-34 150.2 158 50.0
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.3e-34 150.2 163 48.5
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.3e-34 150.2 163 48.5
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 1.3e-34 150.2 165 49.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.7e-34 149.8 159 49.1
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.7e-34 149.8 163 51.5
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 2.2e-34 149.4 164 50.6
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.2e-34 149.4 163 48.5
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 2.9e-34 149.1 165 49.1
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.8e-34 148.7 165 49.7
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 5.0e-34 148.3 162 52.5
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 6.5e-34 147.9 163 49.1
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.5e-34 147.9 165 47.9
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 8.5e-34 147.5 165 49.1
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 8.5e-34 147.5 163 48.5
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 8.5e-34 147.5 165 48.5
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.1e-33 147.1 158 51.3
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.5e-33 146.7 163 47.2
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.9e-33 146.4 163 47.2
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 2.5e-33 146.0 163 46.0
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 4.2e-33 145.2 169 49.1
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 7.2e-33 144.4 163 47.9
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 7.2e-33 144.4 162 48.8
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 9.4e-33 144.1 156 56.4
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.2e-32 143.7 157 51.6
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.2e-32 143.7 163 47.9
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.6e-32 143.3 161 48.4
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.1e-32 142.9 163 47.9
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 3.6e-32 142.1 155 55.5
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.1e-32 141.4 157 49.0
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.0e-32 141.0 166 47.6
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.8e-31 139.8 166 47.6
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 4.0e-31 138.7 166 48.2
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 5.2e-31 138.3 167 44.9
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 8.8e-31 137.5 166 48.2
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 8.8e-31 137.5 162 47.5
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.2e-30 137.1 166 47.6
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.2e-30 137.1 164 51.2
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.5e-30 136.7 166 48.2
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.0e-30 136.3 165 46.1
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 4.4e-30 135.2 155 52.9
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 9.7e-30 134.0 178 42.7
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-29 133.7 159 45.9
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.7e-29 133.3 173 45.1
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.7e-29 133.3 165 47.3
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.8e-29 132.5 159 44.7
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 4.8e-29 131.7 165 43.6
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 8.2e-29 131.0 162 46.9
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.1e-28 130.6 171 45.0
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.4e-28 130.2 162 46.9
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.8e-28 129.8 162 46.9
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 1.8e-28 129.8 171 44.4
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.8e-28 129.8 171 44.4
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 5.3e-28 128.3 169 45.0
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 5.9e-27 124.8 175 42.9
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 5.9e-27 124.8 164 44.5
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 5.9e-27 124.8 164 45.7
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.0e-26 124.0 165 43.6
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 2.2e-26 122.9 162 46.9
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.9e-26 122.5 154 45.5
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 3.8e-26 122.1 149 49.0
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 3.8e-26 122.1 164 43.9
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 2.5e-25 119.4 169 42.6
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 2.5e-25 119.4 167 44.3
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 3.2e-25 119.0 156 44.9
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 9.4e-25 117.5 178 41.6
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.1e-24 116.3 188 39.4
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 3.6e-24 115.5 172 40.7
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 8.0e-24 114.4 215 37.2
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 8.0e-24 114.4 181 39.8
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.0e-23 114.0 181 39.8
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.4e-23 113.6 215 37.2
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 1.4e-23 113.6 166 42.8
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 5.2e-23 111.7 177 39.5
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 5.2e-23 111.7 177 39.5
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 6.8e-23 111.3 165 43.0
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 8.8e-23 110.9 191 39.3
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.2e-22 110.5 171 45.6
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 2.6e-22 109.4 190 38.9
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.4e-22 108.6 167 44.3
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 4.4e-22 108.6 164 37.8
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 9.8e-22 107.5 195 37.4
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 9.8e-22 107.5 158 43.7
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.3e-21 107.1 154 42.2
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 1.7e-21 106.7 198 35.4
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 3.7e-21 105.5 207 35.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 3.7e-21 105.5 193 38.3
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 4.8e-21 105.1 163 39.3
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 8.3e-21 104.4 149 43.0
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 8.3e-21 104.4 159 42.8
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.8e-20 103.2 166 38.0
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.4e-20 102.8 167 37.1
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 4.1e-20 102.1 165 35.8
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 5.9e-19 98.2 176 38.1
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 3.8e-18 95.5 138 45.7
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 2.5e-17 92.8 165 33.3
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.3e-17 92.4 163 33.7
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-16 90.5 161 33.5
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 8.0e-16 87.8 154 38.3
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.0e-15 87.4 174 32.8
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.4e-15 87.0 169 37.9
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.3e-15 86.3 156 37.8
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 2.0e-14 83.2 162 35.8
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.6e-14 82.8 152 35.5
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 5.7e-14 81.6 150 34.7
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.7e-14 81.6 145 37.2
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 3.7e-13 79.0 193 32.6
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 8.3e-13 77.8 153 33.3
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.4e-12 77.0 152 34.9
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.2e-11 73.9 166 34.3
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 7.8e-11 71.2 118 39.8
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 1.7e-10 70.1 157 32.5
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 4.0e-07 58.9 145 29.0
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 2.6e-06 56.2 72 38.9


User provided reference genes

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