Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6900 Avicennia marina HOM05D024717 ORTHO05D002692 2.7e-86 322.0 165 100.0
Migut.M01794 Erythranthe guttata HOM05D024717 ORTHO05D002692 5.1e-29 131.7 170 51.8
Oeu020128.1 Olea europaea HOM05D002846 ORTHO05D002692 1.1e-18 97.4 144 48.6
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 4.0e-18 95.5 160 44.4
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 1.2e-17 94.0 166 40.4
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 4.5e-17 92.0 165 41.8
unitig_62.g23272 Utricularia gibba HOM05D024717 ORTHO05D002692 2.2e-16 89.7 124 48.4
unitig_578.g16004 Utricularia gibba HOM05D024717 ORTHO05D002692 1.4e-15 87.0 118 46.6
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 7.9e-14 81.3 158 42.4
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 1.3e-13 80.5 169 42.0
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.9e-12 76.6 116 48.3
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.1e-11 73.2 106 50.0
ECA246G4222 Erigeron canadensis HOM05D002846 ORTHO05D002692 8.1e-11 71.2 127 44.1
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.1e-10 70.9 169 38.5
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.4e-10 70.5 156 35.3
Ciclev10009727m.g Citrus clementina HOM05D002846 ORTHO05D002692 1.4e-10 70.5 138 39.9
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 2.4e-10 69.7 140 37.1
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 3.1e-10 69.3 133 41.4
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 4.0e-10 68.9 150 36.0
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 4.0e-10 68.9 165 37.0
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 9.0e-10 67.8 150 38.0
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.5e-09 67.0 109 42.2
Nn1g03606 Nelumbo nucifera HOM05D002846 ORTHO05D002692 2.0e-09 66.6 132 41.7
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.6e-09 66.2 168 35.1
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 2.6e-09 66.2 121 40.5
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.6e-09 66.2 172 36.0
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 4.5e-09 65.5 169 36.7
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 4.5e-09 65.5 155 36.1
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 5.8e-09 65.1 106 47.2
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.0e-08 64.3 163 34.4
Lj1A867G31 Lonicera japonica HOM05D002846 ORTHO05D002692 1.0e-08 64.3 120 44.2
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.3e-08 63.9 130 42.3
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 1.7e-08 63.5 121 45.5
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 1.7e-08 63.5 172 36.0
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 2.9e-08 62.8 119 43.7
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 2.9e-08 62.8 142 40.1
Gorai.013G163000 Gossypium raimondii HOM05D002846 ORTHO05D002692 2.9e-08 62.8 140 39.3
Oeu027251.1 Olea europaea HOM05D002846 ORTHO05D002692 2.9e-08 62.8 150 38.0
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 3.8e-08 62.4 123 38.2
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 4.9e-08 62.0 157 38.9
CiPaw.12G127500 Carya illinoinensis HOM05D002846 ORTHO05D002692 6.5e-08 61.6 148 34.5
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 6.5e-08 61.6 170 31.8
Manes.03G127850 Manihot esculenta HOM05D002846 ORTHO05D002692 8.4e-08 61.2 156 31.4
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 1.4e-07 60.5 159 37.1
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.4e-07 60.5 170 37.1
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 1.4e-07 60.5 177 35.0
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 1.9e-07 60.1 147 35.4
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.9e-07 60.1 156 35.9
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 1.9e-07 60.1 121 43.8
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.9e-07 60.1 113 43.4
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.9e-07 60.1 172 34.9
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.5e-07 59.7 114 41.2
Phvul.011G136900 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.5e-07 59.7 114 40.4
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 3.2e-07 59.3 146 37.7
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.2e-07 59.3 99 41.4
unitig_0.g754 Utricularia gibba HOM05D024717 ORTHO05D002692 3.2e-07 59.3 101 41.6
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 3.2e-07 59.3 101 43.6
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 4.2e-07 58.9 133 36.8
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 4.2e-07 58.9 151 33.1
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 5.5e-07 58.5 159 34.0
Glyma.13G308000 Glycine max HOM05D002846 ORTHO05D002692 5.5e-07 58.5 115 41.7
Gohir.A13G140400 Gossypium hirsutum HOM05D002846 ORTHO05D002692 5.5e-07 58.5 140 38.6
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 5.5e-07 58.5 127 44.1
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 7.1e-07 58.2 112 42.0
HanXRQChr05g0159181 Helianthus annuus HOM05D002846 ORTHO05D002692 9.3e-07 57.8 125 38.4
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 9.3e-07 57.8 100 42.0
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 1.2e-06 57.4 130 38.5
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 1.2e-06 57.4 113 45.1
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 1.2e-06 57.4 112 40.2
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.2e-06 57.4 131 38.2
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.2e-06 57.4 122 38.5
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 1.2e-06 57.4 110 41.8
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 1.6e-06 57.0 105 42.9
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.6e-06 57.0 105 39.0
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 2.1e-06 56.6 157 33.8
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.1e-06 56.6 109 38.5
Eucgr.A01716 Eucalyptus grandis HOM05D002846 ORTHO05D002692 2.7e-06 56.2 105 39.0
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 2.7e-06 56.2 155 33.5
Lj1A758T10 Lonicera japonica HOM05D002846 ORTHO05D002692 2.7e-06 56.2 119 39.5
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 2.7e-06 56.2 116 37.9
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 2.7e-06 56.2 119 42.0
Gohir.D13G145200 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.5e-06 55.8 139 37.4
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 3.5e-06 55.8 163 33.1
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 3.5e-06 55.8 152 33.6
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 3.5e-06 55.8 134 37.3
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 4.6e-06 55.5 160 36.9
C05p41700 Brassica napus HOM05D002846 ORTHO05D002692 4.6e-06 55.5 159 34.0
BolC5t32905H Brassica oleracea HOM05D002846 ORTHO05D002692 4.6e-06 55.5 159 34.0
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 4.6e-06 55.5 175 32.0
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 4.6e-06 55.5 112 39.3
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 6.0e-06 55.1 124 38.7
Nitab4.5_0002229g0220 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.0e-06 55.1 133 36.8
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 6.0e-06 55.1 115 40.0
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 7.9e-06 54.7 146 36.3
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 7.9e-06 54.7 168 33.9


User provided reference genes

Program Settings