Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 2.9e-79 298.5 155 100.0
SGA_v2.0_scaffold73G24313 Striga asiatica HOM05D008538 ORTHO05D010142 1.7e-26 123.2 120 59.2
Migut.M00874 Erythranthe guttata HOM05D008538 ORTHO05D010142 4.2e-25 118.6 129 61.2
Oeu008026.2 Olea europaea HOM05D008538 ORTHO05D010142 1.6e-21 106.7 157 48.4
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 3.5e-16 89.0 117 48.7
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 7.9e-16 87.8 117 47.0
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.3e-15 87.0 117 48.7
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 1.3e-15 87.0 117 48.7
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 8.7e-15 84.3 118 48.3
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 7.4e-14 81.3 117 46.2
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 6.9e-12 74.7 114 44.7
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 1.1e-09 67.4 114 43.0
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.1e-09 67.4 112 42.9
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.9e-09 66.6 114 41.2
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 3.2e-09 65.9 114 42.1
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 5.5e-09 65.1 114 44.7
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 5.5e-09 65.1 114 43.0
Nitab4.5_0001320g0090 Nicotiana tabacum HOM05D008538 ORTHO05D010142 7.2e-09 64.7 89 44.9
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 9.4e-09 64.3 114 40.4
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 2.1e-08 63.2 112 42.0
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 4.6e-08 62.0 124 41.1
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 4.6e-08 62.0 124 41.1
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 6.1e-08 61.6 118 44.1
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 6.1e-08 61.6 119 39.5
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 1.4e-07 60.5 117 39.3
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 1.8e-07 60.1 114 38.6
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 1.8e-07 60.1 124 40.3
Ciclev10010245m.g Citrus clementina HOM05D008538 ORTHO05D010142 2.3e-07 59.7 114 40.4
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 2.3e-07 59.7 114 38.6
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 3.9e-07 58.9 124 39.5
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 3.9e-07 58.9 96 42.7
HanXRQChr08g0234631 Helianthus annuus HOM05D008538 ORTHO05D010142 6.7e-07 58.2 110 39.1
Oeu030431.1 Olea europaea HOM05D008237 ORTHO05D011518 1.1e-06 57.4 60 56.7
Manes.03G116200 Manihot esculenta HOM05D008538 ORTHO05D010142 1.5e-06 57.0 117 39.3
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 5.7e-06 55.1 82 42.7


User provided reference genes

Program Settings