Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6762 Avicennia marina HOM05D006994 ORTHO05D008229 0.0e+00 1946.4 961 100.0
MSTRG.15058 Avicennia marina HOM05D006994 ORTHO05D008229 5.8e-234 815.1 1109 47.0
SalBow7G4498 Salvia bowleyana HOM05D006994 ORTHO05D008229 6.8e-126 456.1 1076 34.5
Oeu041607.1 Olea europaea HOM05D006994 ORTHO05D008229 2.5e-83 314.7 684 35.5
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 2.2e-52 211.8 1147 26.6
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 1.2e-50 206.1 1185 25.5
Migut.H02109 Erythranthe guttata HOM05D006994 ORTHO05D008229 6.6e-44 183.7 818 28.5
Sopen07g029270 Solanum pennellii HOM05D006994 ORTHO05D008229 8.9e-41 173.3 1112 25.0
PGSC0003DMG400017294 Solanum tuberosum HOM05D006994 ORTHO05D008229 1.4e-38 166.0 1120 24.6
Oeu014262.1 Olea europaea HOM05D006994 ORTHO05D008229 1.8e-38 165.6 209 52.2
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 2.7e-37 161.8 1141 24.3
Nitab4.5_0007153g0010 Nicotiana tabacum HOM05D006994 ORTHO05D008229 3.9e-36 157.9 1114 23.6
Nitab4.5_0001121g0180 Nicotiana tabacum HOM05D006994 ORTHO05D008229 5.0e-36 157.5 1010 24.3
Solyc07g055910.4 Solanum lycopersicum HOM05D006994 ORTHO05D008229 2.8e-34 151.8 883 25.3
Cc05_g09220 Coffea canephora HOM05D006994 ORTHO05D008229 3.6e-34 151.4 1133 23.8
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 1.4e-33 149.4 1031 26.1
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.8e-33 149.1 1063 25.8
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 9.2e-30 136.7 1051 23.1
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 1.6e-29 136.0 1214 22.2
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 1.0e-28 133.3 867 23.9
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 1.2e-26 126.3 969 25.0
CAN.G585.58 Capsicum annuum HOM05D006994 ORTHO05D008229 2.1e-26 125.6 1104 23.6
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 2.8e-26 125.2 503 29.8
CAN.G1332.1 Capsicum annuum HOM05D006994 ORTHO05D008229 2.3e-25 122.1 1131 23.7
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 4.0e-25 121.3 571 24.3
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 9.9e-24 116.7 1185 22.0
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 1.4e-22 112.8 1228 22.6
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 7.1e-22 110.5 783 24.0
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 7.1e-22 110.5 1191 21.7
CAN.G1481.2 Capsicum annuum HOM05D006994 ORTHO05D008229 2.7e-21 108.6 1109 22.7
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 3.5e-21 108.2 700 24.3
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 6.6e-20 104.0 993 24.0
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 6.6e-20 104.0 1175 21.4
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 1.5e-19 102.8 1206 23.5
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.9e-19 102.4 993 23.7
vmacro12443 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 3.3e-19 101.7 204 38.2
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 4.3e-19 101.3 1128 22.7
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 1.1e-17 96.7 699 23.9
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 2.3e-17 95.5 557 26.2
Sed0007753 Sechium edule HOM05D006994 ORTHO05D008229 4.0e-17 94.7 898 23.3
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 1.2e-16 93.2 1173 22.5
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 5.8e-16 90.9 997 23.7
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 1.7e-15 89.4 899 24.5
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 3.8e-15 88.2 149 35.6
Cpa.g.sc50.70 Carica papaya HOM05D006994 ORTHO05D008229 1.4e-14 86.3 140 39.3
Hma1.2p1_0036F.1_g023740 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 4.1e-14 84.7 283 31.4
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 1.2e-13 83.2 600 22.5
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 2.1e-13 82.4 830 22.3
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 3.5e-13 81.6 171 35.1
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 7.8e-13 80.5 542 26.2
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.5e-11 76.3 1216 21.3
Cfa022556 Carpinus fangiana HOM05D006994 ORTHO05D008229 2.5e-11 75.5 157 33.1
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 1.6e-10 72.8 507 24.3
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 3.6e-10 71.6 544 24.4
DCAR_021306 Daucus carota HOM05D006994 ORTHO05D008229 4.7e-10 71.2 363 27.5
Sed0021960 Sechium edule HOM05D006994 ORTHO05D008229 3.1e-09 68.6 292 28.1
HPP92_005186 Vanilla planifolia HOM05D006994 ORTHO05D008229 3.1e-09 68.6 148 33.8
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 6.9e-09 67.4 673 23.6
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 6.9e-09 67.4 77 39.0
MELO3C014460.2 Cucumis melo HOM05D006994 ORTHO05D008229 1.5e-08 66.2 146 35.6
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 2.0e-08 65.9 77 37.7
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 2.6e-08 65.5 156 28.8
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 7.6e-08 63.9 186 29.0
CDE02G3671 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 9.9e-08 63.5 63 44.4
Atru.chr6.1475 Acer truncatum HOM05D006994 ORTHO05D008229 1.3e-07 63.2 50 52.0
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 1.7e-07 62.8 463 25.7
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 1.1e-06 60.1 1092 19.9
SEGI_38675 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 1.4e-06 59.7 51 47.1
FAN05G1234 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.9e-06 59.3 185 27.6
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 3.2e-06 58.5 514 24.3
CDE08G1216 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 5.4e-06 57.8 204 26.5
AL5G40540 Arabidopsis lyrata HOM05D014107 ORTHO05D008229 7.1e-06 57.4 219 26.9
CiPaw.03G188100 Carya illinoinensis HOM05D006994 ORTHO05D008229 7.1e-06 57.4 243 25.9


User provided reference genes

Program Settings