Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6642 Avicennia marina HOM05D004793 ORTHO05D004423 6.1e-55 217.2 110 100.0
SalBow7G3719 Salvia bowleyana HOM05D004793 ORTHO05D004423 2.1e-18 95.9 117 53.0
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 1.7e-17 92.8 127 56.7
Oeu029974.1 Olea europaea HOM05D027131 ORTHO05D013900 4.4e-13 78.2 85 54.1
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 1.7e-12 76.3 121 47.9
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 1.7e-12 76.3 121 47.9
MSTRG.14923 Avicennia marina HOM05D004793 ORTHO05D004423 7.8e-10 67.4 131 39.7
SGA_v2.0_scaffold73G24508 Striga asiatica HOM05D004793 ORTHO05D004423 1.7e-09 66.2 120 42.5
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 2.3e-09 65.9 115 38.3
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 2.3e-09 65.9 115 38.3
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 3.0e-09 65.5 140 36.4
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 1.1e-08 63.5 129 36.4
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 2.5e-08 62.4 119 37.0
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 7.3e-08 60.8 134 35.1
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 9.6e-08 60.5 128 34.4
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.3e-07 60.1 135 34.1
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.3e-07 60.1 121 36.4
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.6e-07 59.7 126 34.9
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.6e-07 59.7 126 34.9
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 1.6e-07 59.7 126 37.3
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 3.6e-07 58.5 130 33.1
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 3.6e-07 58.5 123 36.6
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 3.6e-07 58.5 131 36.6
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 3.6e-07 58.5 126 36.5
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 4.8e-07 58.2 130 33.1
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 6.2e-07 57.8 127 35.4
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 6.2e-07 57.8 135 34.8
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.1e-06 57.0 124 38.7
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.4e-06 56.6 142 33.1
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 1.4e-06 56.6 127 32.3
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 2.4e-06 55.8 125 36.0
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 2.4e-06 55.8 133 33.8
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 4.0e-06 55.1 129 34.9
Lsat_1_v5_gn_7_95461 Lactuca sativa HOM05D004793 ORTHO05D004423 4.0e-06 55.1 104 38.5
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.3e-06 54.7 125 31.2
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.3e-06 54.7 125 31.2
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 5.3e-06 54.7 125 31.2
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 6.9e-06 54.3 136 36.0
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 6.9e-06 54.3 135 34.8
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 6.9e-06 54.3 120 35.0
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 9.0e-06 53.9 44 56.8


User provided reference genes

Program Settings