Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 3.8e-134 481.5 238 100.0
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 8.5e-102 374.0 232 79.3
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.5e-90 336.7 227 71.4
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 7.4e-90 334.3 220 75.0
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 7.4e-90 334.3 220 75.0
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 3.7e-89 332.0 219 69.9
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 4.8e-89 331.6 216 72.7
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 8.2e-89 330.9 226 68.6
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 5.3e-88 328.2 227 68.7
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.0e-87 326.2 248 68.1
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 6.5e-86 321.2 227 66.5
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 8.5e-86 320.9 211 70.6
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 1.1e-85 320.5 210 68.1
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.5e-85 320.1 204 72.5
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.5e-85 320.1 207 71.5
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 7.2e-85 317.8 220 68.2
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 7.2e-85 317.8 214 70.1
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 9.4e-85 317.4 227 67.0
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.2e-84 317.0 220 68.2
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.2e-84 317.0 227 67.8
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.6e-84 316.6 219 67.1
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.1e-84 316.2 206 70.9
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.7e-84 315.8 216 68.1
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.6e-84 315.5 232 66.4
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 6.1e-84 314.7 232 65.5
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 6.1e-84 314.7 233 66.1
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 8.0e-84 314.3 212 70.3
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 8.0e-84 314.3 219 68.9
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 1.4e-83 313.5 227 66.5
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.8e-83 313.2 203 71.4
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.8e-83 313.2 215 69.3
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 3.0e-83 312.4 232 64.7
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 3.0e-83 312.4 227 65.6
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 5.2e-83 311.6 221 67.4
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 8.8e-83 310.8 206 68.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 8.8e-83 310.8 215 68.8
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.5e-82 310.1 205 70.7
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 1.5e-82 310.1 214 67.8
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 3.3e-82 308.9 216 67.1
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 4.4e-82 308.5 227 64.3
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 5.7e-82 308.1 232 64.2
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 7.5e-82 307.8 224 65.2
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 1.3e-81 307.0 232 64.7
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.7e-81 306.6 208 66.8
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 2.2e-81 306.2 224 65.6
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 4.8e-81 305.1 207 69.6
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 6.3e-81 304.7 214 67.8
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 8.2e-81 304.3 206 68.9
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 8.2e-81 304.3 206 68.9
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.1e-80 303.9 206 68.4
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.4e-80 303.5 218 64.2
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.8e-80 303.1 221 66.5
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 4.1e-80 302.0 205 69.8
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 9.1e-80 300.8 234 62.4
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 2.0e-79 299.7 231 64.1
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.0e-79 299.7 215 66.5
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 7.7e-79 297.7 219 63.5
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.2e-78 296.2 213 67.1
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 2.9e-78 295.8 211 65.9
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 2.5e-77 292.7 205 67.3
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 7.2e-77 291.2 219 61.6
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.2e-76 290.4 219 61.6
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.6e-76 290.0 219 61.6
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 1.6e-76 290.0 210 63.8
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 4.7e-76 288.5 207 61.8
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 1.8e-75 286.6 219 59.8
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.2e-74 283.9 223 61.4
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 2.0e-74 283.1 223 61.4
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 4.4e-74 282.0 185 70.3
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 7.5e-74 281.2 217 62.7
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 9.8e-74 280.8 179 75.4
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 2.8e-73 279.3 221 59.3
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.8e-73 279.3 221 60.2
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 4.8e-73 278.5 221 58.8
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 6.3e-73 278.1 215 60.0
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.4e-72 276.9 222 60.8
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 2.4e-72 276.2 223 59.2
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.2e-71 273.9 212 64.6
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.6e-71 273.5 227 56.8
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 3.5e-71 272.3 214 57.9
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 5.5e-69 265.0 192 66.1
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 5.5e-69 265.0 190 71.1
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 9.5e-69 264.2 194 65.5
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 1.2e-68 263.8 196 64.8
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 1.5e-66 256.9 173 68.2
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.1e-64 250.8 207 60.4
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 5.4e-64 248.4 208 58.2
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 5.4e-64 248.4 158 70.9
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.0e-62 244.2 221 55.7
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 1.0e-59 234.2 162 69.1
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 2.6e-58 229.6 174 61.5
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.2e-57 226.5 193 59.1
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 3.7e-57 225.7 196 56.6
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 1.1e-56 224.2 219 52.1
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 5.0e-54 215.3 171 57.9
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 6.6e-54 214.9 246 48.8
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 1.7e-49 200.3 227 44.5
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 6.4e-49 198.4 130 73.1
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 1.1e-45 187.6 177 50.8
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.2e-43 178.7 200 45.5
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 9.9e-42 174.5 212 42.9
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 3.2e-40 169.5 105 75.2
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.3e-30 136.7 160 44.4
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 3.4e-26 122.9 81 67.9
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.3e-25 120.9 97 57.7
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 4.9e-25 119.0 91 57.1
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.8e-19 100.5 88 47.7
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 6.4e-17 92.0 94 46.8
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 7.6e-10 68.6 90 40.0
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.3e-09 67.8 62 50.0


User provided reference genes

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