Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 1.4e-173 612.8 297 100.0
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 2.1e-94 349.7 299 63.5
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 5.6e-79 298.5 299 57.2
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 2.0e-76 290.0 299 55.2
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 3.8e-67 259.2 310 49.4
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 5.5e-66 255.4 304 49.3
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 4.5e-60 235.7 313 47.0
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 1.6e-57 227.3 305 46.6
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 4.4e-55 219.2 307 46.6
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 4.8e-54 215.7 298 45.6
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 8.2e-54 214.9 299 46.8
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 9.1e-53 211.5 300 44.7
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 9.1e-53 211.5 306 43.1
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 1.5e-52 210.7 315 44.1
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 4.5e-52 209.1 314 42.7
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 4.5e-52 209.1 317 43.5
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 7.7e-52 208.4 305 42.3
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 7.7e-52 208.4 318 41.8
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 6.5e-51 205.3 328 41.8
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.5e-51 204.9 333 41.4
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 1.1e-50 204.5 306 42.5
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 1.4e-50 204.1 313 42.5
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 3.2e-50 203.0 324 41.7
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 7.2e-50 201.8 310 43.2
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 1.2e-49 201.1 304 44.4
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 1.8e-48 197.2 311 43.1
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 6.7e-48 195.3 320 41.2
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.8e-48 194.9 336 41.1
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 1.1e-47 194.5 326 42.0
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.5e-47 194.1 306 39.9
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 2.0e-47 193.7 318 39.0
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 7.4e-47 191.8 303 43.2
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 2.8e-46 189.9 318 40.6
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 3.7e-46 189.5 302 41.7
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.1e-45 188.0 319 39.2
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 1.8e-45 187.2 301 42.2
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 1.0e-43 181.4 303 38.9
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 1.0e-43 181.4 317 40.7
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 2.2e-43 180.3 322 39.1
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 3.8e-43 179.5 216 47.7
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 5.0e-43 179.1 301 40.9
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 1.5e-42 177.6 318 38.7
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 1.5e-42 177.6 316 38.9
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 5.5e-42 175.6 337 38.3
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 1.2e-41 174.5 308 38.6
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 1.2e-41 174.5 309 39.2
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 6.1e-41 172.2 337 38.0
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 6.1e-41 172.2 302 40.1
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 6.1e-41 172.2 332 36.1
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.4e-40 171.0 321 38.6
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 1.4e-40 171.0 310 41.3
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.4e-40 171.0 318 40.3
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 5.2e-40 169.1 311 37.3
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 8.8e-40 168.3 327 37.9
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 1.2e-39 167.9 337 37.4
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 1.2e-39 167.9 307 38.8
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 1.5e-39 167.5 309 38.5
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 2.6e-39 166.8 323 36.8
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 2.6e-39 166.8 301 37.5
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 2.2e-38 163.7 318 39.6
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 4.8e-38 162.5 317 35.6
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 6.3e-38 162.2 305 38.4
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.4e-37 161.0 298 37.6
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 1.4e-37 161.0 321 38.9
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 3.1e-37 159.8 322 36.3
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 2.0e-36 157.1 302 39.7
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 3.5e-36 156.4 222 42.3
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 4.5e-36 156.0 311 38.6
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 1.0e-35 154.8 318 37.7
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 2.7e-33 146.7 248 40.7
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 3.6e-33 146.4 228 42.5
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 1.0e-32 144.8 303 38.3
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.4e-32 144.4 303 38.3
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.8e-32 144.1 97 70.1
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 3.0e-32 143.3 297 36.0
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 3.0e-32 143.3 122 58.2
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 6.8e-32 142.1 303 35.3
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 8.8e-32 141.7 211 41.7
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 2.0e-31 140.6 310 33.2
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 3.4e-31 139.8 301 34.6
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 5.7e-31 139.0 300 35.0
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 9.8e-31 138.3 220 41.4
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 1.3e-30 137.9 298 37.2
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 8.3e-30 135.2 300 33.7
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 8.3e-30 135.2 224 38.4
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 1.1e-29 134.8 99 63.6
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.1e-29 134.8 303 34.3
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 4.1e-29 132.9 100 62.0
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 4.1e-29 132.9 299 33.4
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 4.1e-29 132.9 98 67.3
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 9.1e-29 131.7 235 37.9
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 9.1e-29 131.7 77 75.3
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.2e-28 131.3 134 53.7
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.2e-28 131.3 304 35.5
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 7.7e-28 128.6 74 78.4
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 2.9e-27 126.7 82 68.3
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 5.0e-27 125.9 82 68.3
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 5.0e-27 125.9 82 68.3
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 6.6e-27 125.6 82 68.3
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 7.2e-26 122.1 83 67.5
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.1e-25 119.0 149 43.6
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 6.3e-22 109.0 142 42.3
Nitab4.5_0000826g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 5.4e-21 105.9 60 78.3
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 1.2e-20 104.8 96 49.0
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 7.8e-20 102.1 261 33.7
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.3e-19 100.5 165 35.2
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 1.4e-16 91.3 77 49.4
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.2e-15 88.2 56 67.9
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 7.5e-15 85.5 217 33.6
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 7.5e-15 85.5 213 30.0
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 7.5e-15 85.5 213 30.0
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 3.7e-14 83.2 131 43.5
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 4.9e-14 82.8 243 31.3
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 1.1e-10 71.6 37 78.4
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 2.5e-10 70.5 49 63.3
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 3.3e-10 70.1 261 31.0
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 7.3e-10 68.9 37 81.1


User provided reference genes

Program Settings