Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6313 Avicennia marina HOM05D000092 ORTHO05D000042 3.0e-69 265.0 127 100.0
MSTRG.28293 Avicennia marina HOM05D000092 ORTHO05D000042 2.8e-35 152.1 124 66.9
MSTRG.6322 Avicennia marina HOM05D000092 ORTHO05D000042 2.9e-32 142.1 90 77.8
MSTRG.5994 Avicennia marina HOM05D000092 ORTHO05D000042 1.8e-21 106.3 107 53.3
MSTRG.6359 Avicennia marina HOM05D000092 ORTHO05D000042 3.3e-20 102.1 105 52.4
MSTRG.6355 Avicennia marina HOM05D000092 ORTHO05D000042 8.5e-08 60.8 51 56.9
CSS0049903 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.2e-07 58.9 104 32.7
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 58.9 100 35.0
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 58.9 100 35.0
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 4.2e-07 58.5 126 32.5
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 7.2e-07 57.8 95 32.6
Duzib177G0617 Durio zibethinus HOM05D000092 ORTHO05D000042 7.2e-07 57.8 89 37.1
Duzib177G0834 Durio zibethinus HOM05D000092 ORTHO05D000042 1.2e-06 57.0 93 38.7
Rhsim03G0022500 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-06 56.6 92 35.9
Thecc.05G203000 Theobroma cacao HOM05D000092 ORTHO05D000042 1.6e-06 56.6 80 40.0
Duzib177G0393 Durio zibethinus HOM05D000092 ORTHO05D000042 2.1e-06 56.2 89 36.0
VMungo0464G1511 Vigna mungo HOM05D000092 ORTHO05D000042 2.1e-06 56.2 77 39.0
Atru.chr6.3503 Acer truncatum HOM05D000092 ORTHO05D000042 2.7e-06 55.8 90 33.3
Gorai.011G264500 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.7e-06 55.8 95 31.6
Manes.02G211901 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-06 55.8 107 29.9
PGR031G0188 Punica granatum HOM05D000092 ORTHO05D000042 2.7e-06 55.8 129 33.3
Rhsim03G0102200 Rhododendron simsii HOM05D000467 ORTHO05D000379 2.7e-06 55.8 74 40.5
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 6.1e-06 54.7 91 33.0
Cpa.g.c28428.3 Carica papaya HOM05D000092 ORTHO05D000042 6.1e-06 54.7 116 31.9
Lj6C191T2 Lonicera japonica HOM05D000092 ORTHO05D000042 6.1e-06 54.7 83 32.5
Manes.07G062388 Manihot esculenta HOM05D000092 ORTHO05D000042 6.1e-06 54.7 113 32.7
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 6.1e-06 54.7 115 31.3
PGR031G1670 Punica granatum HOM05D000092 ORTHO05D000042 6.1e-06 54.7 129 31.0
Cpa.g.c40686 Carica papaya HOM05D000092 ORTHO05D000042 8.0e-06 54.3 100 34.0
HanXRQChr15g0478971 Helianthus annuus HOM05D000092 ORTHO05D000042 8.0e-06 54.3 74 39.2


User provided reference genes

Program Settings