Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 5.1e-66 254.2 123 100.0
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 1.5e-46 189.5 128 74.2
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 1.9e-44 182.6 110 81.8
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 4.2e-44 181.4 110 80.9
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 6.2e-40 167.5 110 78.2
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 2.4e-36 155.6 112 70.5
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 1.8e-34 149.4 114 68.4
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 6.7e-34 147.5 116 67.2
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 4.3e-33 144.8 116 66.4
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 9.6e-33 143.7 110 63.6
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 9.6e-33 143.7 112 65.2
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 1.6e-32 142.9 110 67.3
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 4.8e-32 141.4 111 65.8
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 1.4e-31 139.8 110 69.1
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 1.4e-31 139.8 111 69.4
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 1.8e-31 139.4 111 69.4
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 3.1e-31 138.7 111 69.4
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 5.3e-31 137.9 110 63.6
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 1.5e-30 136.3 110 65.5
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 4.5e-30 134.8 110 64.5
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 1.3e-29 133.3 116 62.1
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.7e-29 132.9 101 65.3
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.7e-29 132.9 101 65.3
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 1.7e-29 132.9 107 70.1
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 2.9e-29 132.1 124 60.5
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 2.9e-29 132.1 110 62.7
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 2.9e-29 132.1 110 64.5
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 3.8e-29 131.7 114 62.3
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 6.5e-29 131.0 123 58.5
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 6.5e-29 131.0 114 63.2
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 6.5e-29 131.0 111 63.1
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 1.1e-28 130.2 114 61.4
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 1.4e-28 129.8 115 60.0
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 1.4e-28 129.8 114 64.0
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 1.9e-28 129.4 127 58.3
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.9e-28 129.4 113 62.8
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 1.9e-28 129.4 113 62.8
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 3.2e-28 128.6 110 59.1
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 4.2e-28 128.3 110 62.7
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 4.2e-28 128.3 105 64.8
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 7.1e-28 127.5 111 60.4
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 9.3e-28 127.1 113 60.2
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 1.6e-27 126.3 111 64.9
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 2.1e-27 125.9 106 64.2
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 2.7e-27 125.6 110 61.8
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 3.5e-27 125.2 113 61.9
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 1.0e-26 123.6 111 59.5
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 1.0e-26 123.6 118 55.1
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 1.0e-26 123.6 106 62.3
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.3e-26 123.2 123 55.3
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 1.3e-26 123.2 117 58.1
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 1.3e-26 123.2 112 60.7
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 2.3e-26 122.5 116 60.3
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 3.9e-26 121.7 112 64.3
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 3.9e-26 121.7 110 61.8
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.7e-26 120.9 123 54.5
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.7e-26 120.9 123 54.5
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 6.7e-26 120.9 111 60.4
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 6.7e-26 120.9 110 54.5
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.1e-25 120.2 122 54.1
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.5e-25 119.8 119 58.0
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 1.9e-25 119.4 110 60.0
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.9e-25 119.4 123 54.5
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 1.9e-25 119.4 114 55.3
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 2.5e-25 119.0 112 55.4
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 2.5e-25 119.0 115 59.1
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 2.5e-25 119.0 123 53.7
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 2.5e-25 119.0 114 57.0
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 3.3e-25 118.6 112 57.1
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 5.7e-25 117.9 114 54.4
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 5.7e-25 117.9 121 52.9
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 5.7e-25 117.9 121 52.9
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.4e-25 117.5 130 50.0
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 7.4e-25 117.5 122 55.7
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 9.7e-25 117.1 113 57.5
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 9.7e-25 117.1 116 56.0
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 1.6e-24 116.3 114 55.3
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 2.8e-24 115.5 107 58.9
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 2.8e-24 115.5 118 53.4
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 3.7e-24 115.2 113 57.5
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 4.8e-24 114.8 107 56.1
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 6.3e-24 114.4 107 57.0
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 8.2e-24 114.0 110 51.8
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 8.2e-24 114.0 112 58.0
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 1.1e-23 113.6 114 53.5
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 1.1e-23 113.6 110 56.4
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 1.1e-23 113.6 114 57.0
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.8e-23 112.8 107 57.0
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 2.4e-23 112.5 112 58.9
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 2.4e-23 112.5 107 56.1
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.4e-23 112.5 110 56.4
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.4e-23 112.5 110 56.4
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 3.1e-23 112.1 124 50.8
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 3.1e-23 112.1 118 53.4
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 3.1e-23 112.1 118 54.2
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 4.1e-23 111.7 107 55.1
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 6.9e-23 110.9 106 56.6
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 9.0e-23 110.5 107 57.0
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 9.0e-23 110.5 107 57.0
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 9.0e-23 110.5 107 57.0
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 9.0e-23 110.5 107 55.1
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 1.5e-22 109.8 107 54.2
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 2.6e-22 109.0 107 56.1
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 2.6e-22 109.0 114 52.6
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 5.9e-22 107.8 106 52.8
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 7.6e-22 107.5 106 54.7
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 1.0e-21 107.1 114 53.5
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 5.0e-21 104.8 107 54.2
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 6.5e-21 104.4 107 55.1
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 8.5e-21 104.0 110 50.0
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 1.1e-20 103.6 115 55.7
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 1.4e-20 103.2 107 57.0
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 1.4e-20 103.2 107 57.0
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 1.9e-20 102.8 118 50.8
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 4.2e-20 101.7 110 49.1
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 4.2e-20 101.7 107 55.1
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 5.5e-20 101.3 108 52.8
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 5.5e-20 101.3 106 56.6
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.2e-19 100.1 106 53.8
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 2.7e-19 99.0 104 55.8
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 4.6e-19 98.2 124 47.6
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.0e-18 97.1 110 50.9
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 1.1e-17 93.6 110 49.1
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 1.5e-17 93.2 109 49.5
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 6.3e-16 87.8 109 48.6
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 5.5e-12 74.7 104 45.2
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 9.4e-12 73.9 105 41.0
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 1.2e-11 73.6 109 45.0
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 5.1e-10 68.2 103 42.7
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 7.4e-09 64.3 101 40.6
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 1.8e-07 59.7 113 39.8
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 1.5e-06 56.6 76 47.4
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 1.5e-06 56.6 76 47.4


User provided reference genes

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