Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 9.0e-165 583.6 303 100.0
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 5.6e-82 308.5 310 58.4
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 3.4e-71 272.7 307 53.4
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 7.1e-69 265.0 305 53.4
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.7e-67 260.4 313 52.4
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 1.9e-58 230.3 312 44.6
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 7.3e-58 228.4 306 50.3
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 4.4e-55 219.2 328 46.3
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 4.0e-48 196.1 314 43.9
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 5.3e-48 195.7 307 41.7
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.9e-48 195.3 308 42.2
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 1.4e-45 187.6 306 39.2
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 5.4e-45 185.7 306 38.9
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 4.6e-44 182.6 288 40.6
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 3.9e-43 179.5 305 39.0
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 2.8e-41 173.3 307 38.8
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 9.9e-39 164.9 261 42.1
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.9e-38 163.3 308 38.0
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 3.2e-37 159.8 307 38.8
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 4.2e-37 159.5 306 37.3
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 7.1e-37 158.7 287 38.0
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 2.1e-36 157.1 316 37.3
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 4.6e-36 156.0 308 37.0
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 3.3e-34 149.8 267 39.0
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 4.3e-34 149.4 306 35.6
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 7.4e-34 148.7 308 36.7
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.6e-33 147.5 318 35.5
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 1.8e-32 144.1 287 36.2
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 1.2e-31 141.4 297 37.4
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 1.5e-31 141.0 286 35.7
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 2.0e-31 140.6 287 34.8
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 2.6e-31 140.2 287 35.5
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 1.0e-30 138.3 304 34.2
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 2.9e-30 136.7 291 33.7
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 4.9e-30 136.0 288 34.4
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 8.4e-30 135.2 297 36.4
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 1.1e-29 134.8 281 36.7
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 1.4e-29 134.4 286 34.3
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 2.5e-29 133.7 304 32.2
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.2e-28 131.3 285 33.7
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.6e-28 131.0 321 31.8
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 2.7e-28 130.2 288 33.7
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 7.9e-28 128.6 285 34.0
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 1.0e-27 128.3 287 36.6
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.3e-27 127.9 285 34.0
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.3e-27 127.9 285 33.3
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 1.3e-27 127.9 303 34.0
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 3.0e-27 126.7 308 36.4
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 3.9e-27 126.3 315 34.9
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.9e-26 124.0 306 31.4
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 2.5e-26 123.6 305 31.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 3.3e-26 123.2 309 35.9
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 5.7e-26 122.5 286 35.3
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 7.4e-26 122.1 291 32.3
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 7.4e-26 122.1 301 31.2
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 9.7e-26 121.7 284 33.5
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 9.7e-26 121.7 284 33.5
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.8e-25 120.2 307 33.6
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 2.8e-25 120.2 283 31.4
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 3.7e-25 119.8 310 31.6
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 4.8e-25 119.4 310 31.6
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 4.8e-25 119.4 286 34.3
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 1.1e-24 118.2 303 32.3
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 1.1e-24 118.2 305 32.8
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 3.1e-24 116.7 306 32.0
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 6.9e-24 115.5 286 28.7
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 6.9e-24 115.5 302 32.8
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 3.4e-23 113.2 298 29.5
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 4.5e-23 112.8 286 28.3
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 1.0e-22 111.7 294 32.0
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 1.3e-22 111.3 287 30.3
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 1.3e-22 111.3 294 31.3
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-22 110.5 287 30.0
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 5.0e-22 109.4 303 32.3
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 2.5e-21 107.1 305 32.5
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 3.2e-21 106.7 286 30.8
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.2e-21 105.5 287 29.3
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 7.2e-21 105.5 287 29.3
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 9.4e-21 105.1 283 31.1
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 1.2e-20 104.8 284 32.7
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 1.2e-20 104.8 286 32.9
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 2.1e-20 104.0 287 29.3
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 2.7e-20 103.6 287 32.4
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 4.6e-20 102.8 306 28.8
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 6.1e-20 102.4 309 29.4
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 7.9e-20 102.1 287 29.3
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.4e-19 101.3 284 32.0
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.8e-19 100.9 287 28.6
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 3.0e-19 100.1 284 31.3
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.9e-18 97.4 311 30.2
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.3e-17 94.7 114 50.9
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.3e-17 94.7 114 50.9
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.3e-17 94.7 320 29.4
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 2.2e-17 94.0 315 26.7
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 2.2e-17 94.0 304 30.6
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.8e-17 93.6 304 29.3
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 6.3e-17 92.4 315 27.0
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 6.3e-17 92.4 305 30.8
FAN23G1979 Fragaria x ananassa HOM05D003759 ORTHO05D004149 1.1e-16 91.7 309 26.9
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 4.1e-16 89.7 307 27.7
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 4.1e-16 89.7 294 29.3
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 5.3e-16 89.4 284 28.5
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.2e-15 88.2 265 32.1
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.5e-15 87.8 283 28.6
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 1.5e-15 87.8 283 28.3
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.5e-15 87.8 306 27.8
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 2.0e-15 87.4 300 26.7
CsaV3_1G029050 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.6e-15 87.0 68 58.8
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 4.5e-15 86.3 295 29.2
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 1.0e-14 85.1 288 26.7
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.0e-14 85.1 260 29.2
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.3e-14 84.7 182 37.9
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 1.3e-14 84.7 286 29.0
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 1.3e-14 84.7 283 30.7
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 2.2e-14 84.0 380 26.8
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 2.2e-14 84.0 380 26.8
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 2.2e-14 84.0 304 28.9
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 5.0e-14 82.8 290 29.3
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 8.5e-14 82.0 301 30.9
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 1.1e-13 81.6 287 30.3
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 1.4e-13 81.3 300 28.7
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 1.4e-13 81.3 291 27.8
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 1.9e-13 80.9 300 28.7
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 2.5e-13 80.5 300 29.3
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 3.2e-13 80.1 291 27.5
HanXRQChr16g0511321 Helianthus annuus HOM05D003759 ORTHO05D004149 3.2e-13 80.1 93 50.5
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 4.2e-13 79.7 118 44.9
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 4.2e-13 79.7 254 29.9
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 5.5e-13 79.3 294 26.9
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 7.2e-13 79.0 300 29.0
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 7.2e-13 79.0 287 30.0
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 7.2e-13 79.0 307 26.7
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 1.2e-12 78.2 89 51.7
Potri.006G183000 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.2e-12 78.2 251 28.7
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 2.1e-12 77.4 300 28.7
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 2.7e-12 77.0 300 29.3
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 3.6e-12 76.6 284 27.1
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 3.6e-12 76.6 281 29.9
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 3.6e-12 76.6 284 27.1
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 3.6e-12 76.6 287 29.6
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 3.6e-12 76.6 284 27.1
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 3.6e-12 76.6 295 26.8
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 4.7e-12 76.3 302 27.8
Sed0021485 Sechium edule HOM05D003759 ORTHO05D004149 4.7e-12 76.3 264 28.0
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 6.1e-12 75.9 252 27.8
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.3e-11 73.9 79 55.7
Carub.0008s1844 Capsella rubella HOM05D003759 ORTHO05D004149 3.0e-11 73.6 293 25.9
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 3.9e-11 73.2 272 28.3
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 6.7e-11 72.4 290 26.9
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 6.7e-11 72.4 290 26.9
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 8.8e-11 72.0 311 27.7
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 1.5e-10 71.2 131 43.5
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 1.5e-10 71.2 281 28.8
Dinv41365 Davidia involucrata HOM05D003759 ORTHO05D004149 2.0e-10 70.9 65 60.0
DCAR_021655 Daucus carota HOM05D002201 ORTHO05D007560 2.6e-10 70.5 74 50.0
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 3.3e-10 70.1 265 29.4
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 5.7e-10 69.3 286 27.3
HPP92_018342 Vanilla planifolia HOM05D003759 ORTHO05D004149 5.7e-10 69.3 307 25.4
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 7.4e-10 68.9 281 28.5
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 9.7e-10 68.6 302 28.1
ECA240G4545 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.3e-09 68.2 293 29.0
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.3e-09 68.2 102 41.2
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 2.8e-09 67.0 283 26.5
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 2.8e-09 67.0 283 26.5
Nn8g39944 Nelumbo nucifera HOM05D003759 ORTHO05D004149 4.8e-09 66.2 61 57.4
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 1.1e-08 65.1 287 27.9
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 1.4e-08 64.7 264 27.3
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.4e-08 64.7 144 34.7
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.8e-08 64.3 265 28.7
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 1.8e-08 64.3 295 24.1
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 5.3e-08 62.8 104 37.5
BcaB01g04466 Brassica carinata HOM05D003759 ORTHO05D004149 7.0e-08 62.4 279 28.3
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 1.0e-06 58.5 104 37.5
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 2.2e-06 57.4 294 24.8


User provided reference genes

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