Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 1.9e-167 592.4 291 100.0
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 1.8e-82 310.1 283 56.2
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 6.5e-80 301.6 292 55.5
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 5.5e-79 298.5 288 53.5
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 2.0e-73 280.0 292 51.0
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.3e-72 277.3 291 47.8
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 6.1e-70 268.5 264 49.6
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.5e-65 252.3 292 43.5
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.3e-63 246.1 246 47.6
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 2.1e-62 243.4 293 43.3
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 2.1e-62 243.4 296 42.6
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 3.6e-62 242.7 296 42.2
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 2.0e-60 236.9 296 42.6
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 1.7e-59 233.8 296 40.9
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 3.7e-59 232.6 292 43.2
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 4.9e-59 232.3 301 42.5
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.9e-58 230.3 294 42.2
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 4.1e-58 229.2 288 46.2
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 5.4e-58 228.8 297 41.1
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 5.4e-58 228.8 295 42.4
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.6e-57 227.3 282 42.2
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 4.6e-57 225.7 326 38.3
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 4.6e-57 225.7 295 41.7
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 4.6e-57 225.7 298 43.0
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 6.0e-57 225.3 303 43.2
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 6.0e-57 225.3 288 45.1
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 6.6e-56 221.9 300 41.7
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 2.5e-55 219.9 294 41.2
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 3.3e-55 219.5 296 40.9
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 3.3e-55 219.5 299 41.1
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 2.1e-54 216.9 276 44.2
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.1e-54 216.9 301 39.9
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 2.3e-53 213.4 314 38.9
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 5.2e-53 212.2 301 39.2
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 6.8e-53 211.8 290 39.3
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 6.8e-53 211.8 293 41.6
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 7.5e-52 208.4 270 42.2
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 2.2e-51 206.8 260 43.5
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 6.4e-51 205.3 301 38.9
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 1.4e-50 204.1 259 43.2
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 2.4e-50 203.4 294 40.8
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.1e-47 194.5 296 37.2
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.9e-47 193.7 299 37.1
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.2e-46 191.0 256 38.7
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 2.1e-46 190.3 316 36.4
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 1.1e-45 188.0 299 36.8
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.4e-45 187.6 312 34.3
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 6.8e-45 185.3 277 39.4
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 5.8e-44 182.2 317 34.7
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.7e-43 180.6 212 44.3
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 2.2e-43 180.3 298 37.2
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 3.2e-42 176.4 302 40.4
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 7.1e-42 175.3 296 34.8
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 9.2e-42 174.9 297 35.7
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.6e-41 174.1 305 36.1
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 2.7e-41 173.3 291 35.1
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 3.5e-41 172.9 230 38.7
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 1.0e-40 171.4 224 40.2
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 1.0e-40 171.4 297 35.4
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 3.0e-40 169.9 366 30.9
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 5.1e-40 169.1 292 34.9
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 5.1e-40 169.1 292 34.9
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 5.1e-40 169.1 292 34.9
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 5.1e-40 169.1 299 34.1
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 6.6e-40 168.7 292 34.6
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 2.5e-39 166.8 292 33.6
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 5.6e-39 165.6 287 35.5
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 7.3e-39 165.2 174 46.0
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 2.8e-38 163.3 299 34.8
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 4.7e-38 162.5 293 35.2
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 4.2e-34 149.4 291 33.0
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 2.1e-33 147.1 211 37.9
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 1.3e-32 144.4 234 36.8
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.5e-31 141.0 254 33.1
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 4.3e-31 139.4 193 43.0
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 1.6e-30 137.5 279 33.0
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 4.8e-30 136.0 204 40.7
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 6.9e-29 132.1 173 41.0
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 4.4e-28 129.4 181 40.3
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 9.6e-23 111.7 200 33.0
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 1.7e-19 100.9 98 52.0
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.9e-18 97.4 236 31.4
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 7.1e-18 95.5 147 34.0
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 7.9e-17 92.0 185 31.9
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.1e-15 88.2 182 30.2
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 2.6e-12 77.0 62 59.7
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 2.5e-10 70.5 294 24.8
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.1e-08 62.8 73 41.1


User provided reference genes

Program Settings