Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 2.8e-288 994.6 499 100.0
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 6.2e-155 551.6 473 62.4
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 5.4e-151 538.5 465 62.4
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.2e-150 537.3 465 62.4
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 3.5e-150 535.8 471 60.7
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 7.9e-150 534.6 462 61.3
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 9.3e-143 511.1 482 58.3
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.3e-141 507.3 423 63.8
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 2.4e-138 496.5 473 58.1
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 7.6e-137 491.5 480 57.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.0e-136 491.1 464 59.3
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 1.3e-136 490.7 463 59.0
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 2.9e-136 489.6 462 58.0
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 7.1e-135 485.0 477 56.6
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 9.3e-135 484.6 467 57.2
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 2.7e-134 483.0 467 57.4
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 2.3e-133 479.9 466 55.8
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.0e-133 479.6 476 58.2
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 6.3e-131 471.9 471 55.6
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.1e-130 471.1 470 56.4
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 1.4e-130 470.7 464 56.5
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.2e-129 467.6 469 55.9
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.3e-128 464.2 474 55.7
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.3e-128 464.2 465 55.7
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 2.9e-128 463.0 457 56.9
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 3.8e-128 462.6 470 56.2
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 3.8e-128 462.6 471 56.7
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 3.2e-127 459.5 468 55.1
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 5.5e-127 458.8 469 55.9
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 5.5e-127 458.8 417 62.8
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.2e-126 457.6 477 54.3
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 4.6e-126 455.7 468 55.3
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 1.0e-125 454.5 467 54.6
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.0e-125 454.5 481 53.8
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 5.3e-122 442.2 469 53.9
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 6.9e-122 441.8 460 55.4
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 1.2e-121 441.0 466 55.2
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 2.6e-121 439.9 466 54.3
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 4.5e-121 439.1 540 50.0
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 4.5e-121 439.1 460 54.1
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.9e-119 433.7 469 53.7
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 9.4e-119 431.4 466 54.1
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.7e-118 429.9 470 52.6
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.7e-118 429.9 466 54.1
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.6e-118 429.5 475 53.9
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 5.1e-117 425.6 468 53.8
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.1e-116 424.5 426 57.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 2.0e-116 423.7 465 53.1
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 3.3e-116 422.9 469 52.7
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 4.4e-116 422.5 350 65.1
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 9.7e-116 421.4 470 51.9
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.3e-115 421.0 467 52.2
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.3e-115 421.0 466 51.9
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 2.2e-115 420.2 466 51.7
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 8.2e-115 418.3 466 51.5
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 8.2e-115 418.3 463 52.9
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.1e-114 417.9 471 52.4
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.1e-114 417.9 468 51.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.8e-114 417.2 465 53.1
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 5.3e-114 415.6 469 51.0
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.2e-113 414.5 469 52.2
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.2e-113 414.5 465 52.7
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.5e-113 412.9 465 52.7
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.9e-113 412.1 465 51.4
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 6.5e-112 408.7 466 51.1
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 6.5e-112 408.7 468 52.4
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 4.7e-110 402.5 471 50.3
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 8.0e-110 401.7 470 49.8
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.0e-109 401.4 471 50.1
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-106 391.0 488 49.6
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-106 391.0 488 49.6
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.2e-105 387.9 470 49.8
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.5e-103 380.9 473 51.0
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 2.1e-102 377.1 466 49.6
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.8e-101 374.0 466 49.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.3e-101 373.6 456 50.7
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 2.8e-99 366.7 470 48.1
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.8e-98 364.0 467 48.0
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 4.1e-98 362.8 473 47.6
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 5.4e-98 362.5 465 48.4
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 7.7e-97 358.6 464 48.7
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.9e-95 354.0 416 51.7
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.9e-95 354.0 457 47.5
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.6e-94 350.9 479 46.1
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 4.7e-94 349.4 480 47.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 6.1e-94 349.0 331 58.0
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 8.0e-94 348.6 466 47.2
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.0e-93 346.7 468 47.2
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 2.6e-92 343.6 389 50.6
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.1e-90 338.2 406 49.3
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 2.0e-89 334.0 474 44.9
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.8e-82 310.8 306 54.6
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 3.2e-82 310.1 463 43.8
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 3.0e-80 303.5 470 43.0
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.8e-76 289.3 414 44.0
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 7.0e-74 282.3 293 55.6
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.2e-73 281.6 470 38.5
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 2.7e-73 280.4 488 38.5
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 6.6e-72 275.8 448 40.8
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.7e-70 269.6 235 63.0
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 7.5e-68 262.3 460 39.8
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 7.3e-63 245.7 539 36.0
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.4e-58 231.5 483 36.9
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 3.0e-56 223.8 355 44.2
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 4.3e-55 219.9 468 35.0
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.2e-52 211.8 534 32.6
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.0e-44 184.5 206 49.5
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 7.4e-39 166.0 152 60.5
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 9.0e-37 159.1 332 37.0
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.2e-36 158.7 509 29.7
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 6.0e-25 119.8 141 45.4
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 5.7e-23 113.2 499 24.6
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 6.5e-11 73.2 112 44.6
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.4e-07 60.5 178 28.7
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 8.2e-06 56.2 48 58.3


User provided reference genes

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