Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5573 Avicennia marina HOM05D002957 ORTHO05D009332 8.2e-72 273.5 125 100.0
Migut.J00165 Erythranthe guttata HOM05D002957 ORTHO05D009332 7.2e-36 154.1 134 60.4
SalBow5G1577 Salvia bowleyana HOM05D002957 ORTHO05D009332 8.3e-32 140.6 128 57.0
Cfa017203 Carpinus fangiana HOM05D002957 ORTHO05D009332 5.0e-29 131.3 132 50.8
Haze_21005 Corylus avellana HOM05D002957 ORTHO05D009332 1.5e-28 129.8 132 50.0
CiPaw.09G209400 Carya illinoinensis HOM05D002957 ORTHO05D009332 1.2e-25 120.2 137 46.0
Actinidia11584 Actinidia chinensis HOM05D002957 ORTHO05D009332 2.0e-25 119.4 118 54.2
COL.COLO4_14532 Corchorus olitorius HOM05D002957 ORTHO05D009332 2.0e-25 119.4 133 47.4
SGA_v2.0_scaffold85G26733 Striga asiatica HOM05D002957 ORTHO05D009332 2.0e-25 119.4 132 53.0
Oeu034563.1 Olea europaea HOM05D002957 ORTHO05D009332 7.5e-25 117.5 142 46.5
Dinv23112 Davidia involucrata HOM05D002957 ORTHO05D009332 9.8e-25 117.1 139 48.2
Hma1.2p1_0362F.1_g136270 Hydrangea macrophylla HOM05D002957 ORTHO05D009332 1.3e-24 116.7 125 49.6
Lj3A953T52 Lonicera japonica HOM05D002957 ORTHO05D009332 2.2e-24 115.9 132 47.7
vmacro20279 Vaccinium macrocarpon HOM05D002957 ORTHO05D009332 3.7e-24 115.2 118 48.3
QL07p019780 Quercus lobata HOM05D002957 ORTHO05D009332 4.9e-24 114.8 131 48.1
Duzib093G1190 Durio zibethinus HOM05D002957 ORTHO05D009332 6.4e-24 114.4 131 46.6
Gohir.A09G165400 Gossypium hirsutum HOM05D002957 ORTHO05D009332 1.1e-23 113.6 140 45.7
Gohir.D09G161000 Gossypium hirsutum HOM05D002957 ORTHO05D009332 1.1e-23 113.6 140 45.7
Gorai.006G182700 Gossypium raimondii HOM05D002957 ORTHO05D009332 1.1e-23 113.6 140 45.7
HanXRQChr01g0006141 Helianthus annuus HOM05D002957 ORTHO05D009332 1.9e-23 112.8 131 45.8
TAR633G1929 Trochodendron aralioides HOM05D002957 ORTHO05D009332 1.9e-23 112.8 132 47.7
Solyc10g076700.2 Solanum lycopersicum HOM05D002957 ORTHO05D009332 2.4e-23 112.5 130 48.5
Potri.006G100600 Populus trichocarpa HOM05D002957 ORTHO05D009332 5.4e-23 111.3 133 48.1
Sopen10g028300 Solanum pennellii HOM05D002957 ORTHO05D009332 5.4e-23 111.3 130 47.7
GSVIVG01011156001 Vitis vinifera HOM05D002957 ORTHO05D009332 7.0e-23 110.9 131 47.3
ECA248G0294 Erigeron canadensis HOM05D002957 ORTHO05D009332 1.2e-22 110.2 131 46.6
Aqoxy2G00881 Aquilegia oxysepala HOM05D002957 ORTHO05D009332 2.0e-22 109.4 130 46.2
unitig_8.g3227 Utricularia gibba HOM05D002957 ORTHO05D009332 2.0e-22 109.4 119 47.9
Eucgr.K02980 Eucalyptus grandis HOM05D002957 ORTHO05D009332 6.0e-22 107.8 142 41.5
Phvul.010G000900 Phaseolus vulgaris HOM05D002957 ORTHO05D009332 6.0e-22 107.8 95 52.6
CAN.G1004.2 Capsicum annuum HOM05D002957 ORTHO05D009332 7.8e-22 107.5 137 43.8
Cc06_g01310 Coffea canephora HOM05D002957 ORTHO05D009332 7.8e-22 107.5 104 51.0
DCAR_024020 Daucus carota HOM05D002957 ORTHO05D009332 1.0e-21 107.1 129 45.7
Glyma.01G121700 Glycine max HOM05D002957 ORTHO05D009332 1.0e-21 107.1 104 50.0
CSS0035001 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D009332 1.3e-21 106.7 104 52.9
TWI77G0804 Tripterygium wilfordii HOM05D002957 ORTHO05D009332 1.3e-21 106.7 133 42.9
Cpa.g.sc4.46 Carica papaya HOM05D002957 ORTHO05D009332 2.3e-21 105.9 108 49.1
Manes.08G092300 Manihot esculenta HOM05D002957 ORTHO05D009332 2.3e-21 105.9 138 44.2
Thecc.05G015700 Theobroma cacao HOM05D002957 ORTHO05D009332 3.9e-21 105.1 133 45.1
Peaxi162Scf00014g00412 Petunia axillaris HOM05D002957 ORTHO05D009332 5.0e-21 104.8 135 43.7
Lalb_Chr07g0193601 Lupinus albus HOM05D002957 ORTHO05D009332 8.6e-21 104.0 68 63.2
CANSAT35G0815 Cannabis sativa HOM05D002957 ORTHO05D009332 1.1e-20 103.6 128 42.2
Nitab4.5_0001455g0030 Nicotiana tabacum HOM05D002957 ORTHO05D009332 1.1e-20 103.6 129 44.2
Lj3g0019800 Lotus japonicus HOM05D002957 ORTHO05D009332 2.5e-20 102.4 99 47.5
Medtr4g015860 Medicago truncatula HOM05D002957 ORTHO05D009332 3.3e-20 102.1 93 49.5
Nitab4.5_0000119g0130 Nicotiana tabacum HOM05D002957 ORTHO05D009332 3.3e-20 102.1 129 43.4
Ciclev10012720m.g Citrus clementina HOM05D002957 ORTHO05D009332 4.3e-20 101.7 103 51.5
TPR.G13326 Trifolium pratense HOM05D002957 ORTHO05D009332 4.3e-20 101.7 93 49.5
Glyma.03G057800 Glycine max HOM05D002957 ORTHO05D009332 5.6e-20 101.3 71 62.0
Psat7g245080 Pisum sativum HOM05D002957 ORTHO05D009332 7.3e-20 100.9 93 50.5
VMungo0331G1386 Vigna mungo HOM05D002957 ORTHO05D009332 7.3e-20 100.9 92 52.2
arahy.Tifrunner.gnm1.ann1.A2UBGC Arachis hypogaea HOM05D002957 ORTHO05D009332 9.5e-20 100.5 92 50.0
Rhsim05G0215900 Rhododendron simsii HOM05D002957 ORTHO05D009332 9.5e-20 100.5 71 62.0
RhsimUnG0048400 Rhododendron simsii HOM05D002957 ORTHO05D009332 9.5e-20 100.5 71 62.0
arahy.Tifrunner.gnm1.ann1.Z0DP5C Arachis hypogaea HOM05D002957 ORTHO05D009332 2.1e-19 99.4 92 48.9
Actinidia29100 Actinidia chinensis HOM05D002957 ORTHO05D009332 3.6e-19 98.6 68 63.2
PSO339G4196 Papaver somniferum HOM05D002957 ORTHO05D009332 3.6e-19 98.6 118 43.2
PGSC0003DMG400019121 Solanum tuberosum HOM05D002957 ORTHO05D009332 3.6e-19 98.6 71 60.6
AL3G19920 Arabidopsis lyrata HOM05D002957 ORTHO05D009332 8.0e-19 97.4 117 44.4
MBI03_g37291_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D009332 1.1e-18 97.1 116 46.6
PGR004G1270 Punica granatum HOM05D002957 ORTHO05D009332 1.4e-18 96.7 133 43.6
ECA248G2983 Erigeron canadensis HOM05D002957 ORTHO05D009332 1.8e-18 96.3 120 44.2
Lsat_1_v5_gn_5_150440 Lactuca sativa HOM05D002957 ORTHO05D009332 3.1e-18 95.5 118 44.9
ATR0681G382 Amborella trichopoda HOM05D002957 ORTHO05D009332 6.8e-18 94.4 95 48.4
AT3G08920 Arabidopsis thaliana HOM05D002957 ORTHO05D009332 6.8e-18 94.4 117 44.4
CARHR083250 Cardamine hirsuta HOM05D002957 ORTHO05D009332 6.8e-18 94.4 117 43.6
Sabra06G0077400 Salix brachista HOM05D002957 ORTHO05D009332 8.9e-18 94.0 68 61.8
MELO3C009167.2 Cucumis melo HOM05D002957 ORTHO05D009332 1.5e-17 93.2 92 48.9
HPP92_013886 Vanilla planifolia HOM05D002957 ORTHO05D009332 1.5e-17 93.2 67 59.7
HPP92_013880 Vanilla planifolia HOM05D002957 ORTHO05D009332 2.6e-17 92.4 67 58.2
BcaC05g29625 Brassica carinata HOM05D002957 ORTHO05D009332 3.4e-17 92.0 101 46.5
A05p39930 Brassica napus HOM05D002957 ORTHO05D009332 3.4e-17 92.0 113 45.1
C05p58970 Brassica napus HOM05D002957 ORTHO05D009332 3.4e-17 92.0 101 46.5
BraSC256t45931Z Brassica rapa HOM05D002957 ORTHO05D009332 3.4e-17 92.0 113 45.1
Aa31LG5G18880 Aethionema arabicum HOM05D002957 ORTHO05D009332 4.4e-17 91.7 88 50.0
EL10Ac5g12031 Beta vulgaris HOM05D002957 ORTHO05D009332 4.4e-17 91.7 106 44.3
AUR62018658 Chenopodium quinoa HOM05D002957 ORTHO05D009332 4.4e-17 91.7 106 45.3
ClCG10G022140 Citrullus lanatus HOM05D003053 ORTHO05D003431 4.4e-17 91.7 92 48.9
AUR62007341 Chenopodium quinoa HOM05D002957 ORTHO05D009332 5.8e-17 91.3 106 45.3
Thhalv10021504m.g Eutrema salsugineum HOM05D002957 ORTHO05D009332 7.5e-17 90.9 117 41.0
Carub.0003s0803 Capsella rubella HOM05D002957 ORTHO05D009332 9.8e-17 90.5 117 42.7
Sp3g07310 Schrenkiella parvula HOM05D002957 ORTHO05D009332 1.3e-16 90.1 117 42.7
CsaV3_3G033780 Cucumis sativus L. HOM05D002957 ORTHO05D009332 1.7e-16 89.7 92 47.8
SMO203G0236 Selaginella moellendorffii HOM05D002957 ORTHO05D009332 1.7e-16 89.7 90 45.6
BolC5t34550H Brassica oleracea HOM05D002957 ORTHO05D009332 2.2e-16 89.4 105 44.8
Sed0006401 Sechium edule HOM05D002957 ORTHO05D009332 2.9e-16 89.0 92 45.7
THA.LOC104823296 Tarenaya hassleriana HOM05D002957 ORTHO05D009332 2.9e-16 89.0 121 41.3
Ah.12g055380 Amaranthus hybridus HOM05D002957 ORTHO05D009332 1.4e-15 86.7 120 42.5
Os03g0289400 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D009332 2.4e-15 85.9 99 42.4
Hund11202 Selenicereus undatus HOM05D002957 ORTHO05D009332 3.2e-15 85.5 88 44.3
CDE04G0714 Ceratophyllum demersum HOM05D002957 ORTHO05D009332 9.2e-15 84.0 74 50.0
CDE07G1950 Ceratophyllum demersum HOM05D002957 ORTHO05D009332 9.2e-15 84.0 74 50.0
Zm00001eb013370 Zea mays HOM05D002957 ORTHO05D009332 1.3e-13 80.1 94 41.5
Hund11198 Selenicereus undatus HOM05D002957 ORTHO05D009332 1.9e-12 76.3 125 36.8
PRCOL_00002422 Prasinoderma coloniale HOM05D002957 ORTHO05D009332 8.1e-11 70.9 91 40.7
Mapoly0002s0231 Marchantia polymorpha HOM05D002957 ORTHO05D009332 4.0e-10 68.6 113 31.9
Pp3c10_2220 Physcomitrium patens HOM05D002957 ORTHO05D009332 6.8e-10 67.8 70 40.0
CBR_g3156 Chara braunii HOM05D002957 ORTHO05D009332 7.5e-09 64.3 92 35.9


User provided reference genes

Program Settings