Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 5.8e-217 757.3 386 100.0
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 9.6e-87 324.7 423 48.9
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 4.2e-82 309.3 383 51.7
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 3.2e-74 283.1 269 56.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 7.9e-73 278.5 239 61.5
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 3.3e-71 273.1 225 61.8
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 5.6e-71 272.3 394 45.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.6e-71 272.3 308 52.3
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 2.8e-70 270.0 225 63.1
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.7e-70 269.6 228 62.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 4.8e-70 269.2 309 52.8
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.2e-70 268.9 228 62.7
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 1.8e-69 267.3 298 55.0
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.4e-69 266.9 220 64.1
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.1e-69 266.5 228 61.8
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.0e-69 266.2 228 62.7
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 4.0e-69 266.2 314 50.0
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 5.3e-69 265.8 233 61.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 9.0e-69 265.0 235 60.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 9.0e-69 265.0 410 43.4
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.2e-68 264.6 226 62.8
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.2e-68 264.6 316 51.9
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.2e-68 264.6 328 48.5
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.5e-68 262.7 235 58.3
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.3e-67 261.2 317 50.5
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.2e-67 260.4 244 58.6
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.9e-67 260.0 229 59.8
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.9e-67 260.0 401 44.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 3.8e-67 259.6 224 60.3
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 4.9e-67 259.2 298 52.3
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.4e-67 258.5 261 55.2
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 8.4e-67 258.5 225 60.4
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.4e-66 257.7 370 43.5
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.4e-66 257.7 310 50.6
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 2.4e-66 256.9 229 59.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 4.2e-66 256.1 399 43.9
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 5.5e-66 255.8 223 60.1
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 7.1e-66 255.4 389 42.7
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.3e-66 255.0 401 43.9
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.6e-65 254.2 331 47.4
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.1e-65 253.8 298 51.7
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.1e-65 253.8 265 54.0
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 2.1e-65 253.8 386 42.2
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.5e-65 253.1 398 44.2
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 4.6e-65 252.7 252 54.0
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 4.6e-65 252.7 284 51.1
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 6.0e-65 252.3 221 61.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 6.0e-65 252.3 285 52.3
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.3e-64 251.1 231 55.4
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.8e-64 250.8 260 52.3
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 3.0e-64 250.0 300 51.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 5.1e-64 249.2 280 52.1
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.7e-64 248.8 258 55.0
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.5e-63 247.7 365 41.9
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.5e-63 247.7 377 43.8
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.9e-63 247.3 289 48.8
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.5e-63 246.9 266 54.1
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 7.4e-63 245.4 291 50.2
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 7.4e-63 245.4 271 51.7
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.6e-62 244.2 375 42.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 2.8e-62 243.4 264 54.2
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.7e-62 243.0 274 50.7
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.7e-62 243.0 270 52.2
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 6.2e-62 242.3 315 47.3
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.4e-61 240.4 274 50.7
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 3.1e-61 240.0 329 46.8
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 9.0e-61 238.4 302 47.4
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.2e-60 238.0 283 48.4
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-60 237.7 303 48.5
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.5e-60 237.7 332 45.5
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.5e-60 237.7 327 48.0
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 3.4e-60 236.5 223 59.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 4.5e-60 236.1 257 52.9
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 5.8e-60 235.7 333 46.5
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 7.6e-60 235.3 303 47.2
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 7.6e-60 235.3 202 60.4
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.7e-59 234.2 221 58.4
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 3.8e-59 233.0 298 47.7
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.1e-58 231.5 216 56.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.4e-58 231.1 187 64.2
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 4.2e-58 229.6 249 52.6
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.2e-57 228.0 170 67.6
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 6.0e-57 225.7 187 63.6
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 6.0e-57 225.7 187 63.6
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.0e-56 224.9 187 63.1
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.8e-56 224.2 172 67.4
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.3e-56 223.8 187 63.1
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 8.7e-56 221.9 240 48.3
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 7.4e-55 218.8 221 52.0
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.7e-54 216.5 182 65.4
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 8.2e-54 215.3 176 61.9
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.1e-53 213.4 307 42.3
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-52 211.5 221 52.9
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.6e-52 210.3 307 41.7
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-50 204.9 174 62.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.9e-50 204.1 222 53.6
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 4.2e-50 203.0 289 43.9
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.1e-45 188.3 269 44.2
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.1e-45 186.4 169 60.9
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 8.5e-43 178.7 175 60.0
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.7e-41 172.9 167 56.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.7e-41 172.9 193 53.4
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.4e-39 166.4 153 59.5
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 7.4e-39 165.6 169 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 3.2e-34 150.2 239 38.5
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 3.5e-28 130.2 203 44.3
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.3e-27 128.3 185 44.9
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.9e-27 127.1 101 61.4
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.0e-27 126.3 181 44.8
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.5e-27 125.9 188 43.6
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 8.5e-27 125.6 92 63.0
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 3.1e-21 107.1 201 41.8
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 7.0e-21 105.9 171 33.3
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.9e-18 97.8 171 33.3
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 7.5e-15 85.9 61 67.2
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.8e-14 84.0 79 53.2
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 9.1e-13 79.0 55 72.7
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 1.3e-11 75.1 127 39.4
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 3.6e-09 67.0 173 29.5
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 1.2e-07 62.0 58 55.2
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.8e-06 57.4 161 34.8


User provided reference genes

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