Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 8.2e-252 873.2 438 100.0
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 1.7e-172 609.8 434 71.9
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 2.9e-164 582.4 446 66.6
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 4.9e-156 555.1 406 68.2
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 3.3e-152 542.3 434 62.9
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 3.4e-149 532.3 440 60.9
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 3.8e-148 528.9 444 60.1
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 1.9e-147 526.6 435 62.8
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 2.5e-147 526.2 436 62.2
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 2.7e-146 522.7 418 64.4
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 4.6e-146 521.9 436 61.7
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 6.1e-146 521.5 436 62.4
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 1.8e-145 520.0 422 63.0
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 6.7e-145 518.1 440 60.0
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 4.3e-144 515.4 434 59.0
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 1.3e-143 513.8 430 60.2
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 2.4e-142 509.6 438 60.3
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 3.8e-140 502.3 443 57.8
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 1.2e-138 497.3 447 57.3
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 1.6e-138 496.9 437 59.5
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 7.9e-138 494.6 438 59.4
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 1.1e-136 490.7 433 56.1
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 1.1e-136 490.7 417 59.5
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 2.0e-136 490.0 402 60.9
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 2.5e-136 489.6 434 58.1
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 5.7e-136 488.4 431 59.4
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 7.4e-136 488.0 438 58.9
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 9.7e-136 487.6 434 57.8
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 9.7e-136 487.6 416 59.9
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 2.2e-135 486.5 426 58.5
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 2.2e-135 486.5 434 55.8
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.7e-135 485.7 436 58.9
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 6.3e-135 485.0 399 60.2
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 6.3e-135 485.0 432 56.2
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 2.4e-134 483.0 432 55.8
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 3.1e-134 482.6 427 56.7
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 4.5e-133 478.8 416 57.5
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.0e-132 477.6 441 58.3
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 1.7e-132 476.9 427 56.4
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 2.2e-132 476.5 426 56.6
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 3.8e-132 475.7 399 59.4
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 5.0e-132 475.3 413 57.9
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 8.5e-132 474.6 428 57.2
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 4.2e-131 472.2 413 57.9
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 4.2e-131 472.2 409 58.9
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 9.4e-131 471.1 415 57.3
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 1.2e-130 470.7 425 57.2
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 2.1e-130 469.9 415 58.3
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 4.7e-130 468.8 436 55.3
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 4.7e-130 468.8 410 59.5
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 6.1e-130 468.4 426 56.6
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 2.3e-129 466.5 434 56.2
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 8.8e-129 464.5 435 56.1
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 1.1e-128 464.2 417 57.3
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 1.1e-128 464.2 427 55.7
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 4.4e-128 462.2 402 58.0
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 7.4e-128 461.5 400 56.5
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 7.4e-128 461.5 414 55.8
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 4.8e-127 458.8 424 56.1
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 6.3e-127 458.4 413 56.7
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 1.1e-126 457.6 411 58.9
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 1.4e-126 457.2 423 56.7
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 1.4e-126 457.2 430 54.9
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 5.3e-126 455.3 415 55.4
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 1.5e-125 453.8 430 55.6
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 2.9e-124 449.5 431 55.0
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 5.0e-124 448.7 420 55.0
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 1.1e-123 447.6 418 55.5
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 1.1e-123 447.6 349 63.9
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 8.0e-122 441.4 417 54.4
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 8.0e-122 441.4 411 54.7
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 1.4e-121 440.7 391 59.1
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 3.0e-121 439.5 399 56.4
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 5.2e-121 438.7 411 54.3
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 1.1e-120 437.6 494 49.6
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 1.5e-120 437.2 411 54.3
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 2.6e-120 436.4 399 55.9
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 5.7e-120 435.3 416 55.3
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 1.3e-119 434.1 436 53.9
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 2.4e-118 429.9 397 57.7
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 1.2e-117 427.6 373 58.4
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 1.6e-117 427.2 438 52.5
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 3.5e-117 426.0 397 55.9
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 1.1e-107 394.4 417 48.2
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 9.1e-102 374.8 358 56.1
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 1.3e-100 370.9 393 49.4
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 1.5e-96 357.5 345 53.9
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 8.3e-95 351.7 399 48.6
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 4.1e-94 349.4 432 43.8
QL03p056156 Quercus lobata HOM05D006855 ORTHO05D008695 3.5e-93 346.3 294 62.2
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 9.5e-91 338.2 278 60.1
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.1e-86 324.7 405 44.7
Sc11g0000830 Simmondsia chinensis HOM05D006855 ORTHO05D008695 2.5e-83 313.5 297 55.9
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 4.7e-82 309.3 336 48.2
SEGI_15055 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 6.6e-76 288.9 277 53.4
Hund25410 Selenicereus undatus HOM05D006855 ORTHO05D008695 5.2e-73 279.3 327 49.2
FvH4_4g25240 Fragaria vesca HOM05D006855 ORTHO05D008695 1.3e-71 274.6 264 56.8
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 3.5e-61 240.0 361 39.6
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 6.0e-61 239.2 433 37.6
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 2.3e-60 237.3 396 38.1
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 2.5e-59 233.8 298 44.6
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 4.4e-56 223.0 174 60.3
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 1.0e-52 211.8 240 47.9
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 1.3e-47 194.9 180 49.4
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 3.2e-46 190.3 219 50.2
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.0e-44 185.3 141 62.4
SMO203G0223 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 6.7e-44 182.6 243 42.4
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.1e-43 181.8 142 61.3
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.1e-41 175.3 136 61.0
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 2.6e-40 170.6 144 57.6
SMO327G0043 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 3.8e-39 166.8 287 37.6
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 6.7e-28 129.4 119 53.8
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.4e-25 121.7 122 52.5
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 6.9e-25 119.4 134 45.5
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.2e-24 118.6 119 52.1
Sabra10G0018700 Salix brachista HOM05D000933 ORTHO05D000820 2.6e-24 117.5 129 47.3
Sabra12G0027400 Salix brachista HOM05D005071 ORTHO05D006069 1.5e-19 101.7 340 28.5
Actinidia17702 Actinidia chinensis HOM05D005071 ORTHO05D006069 2.5e-19 100.9 337 29.1
CsaV3_1G005050 Cucumis sativus L. HOM05D005071 ORTHO05D006069 2.5e-19 100.9 346 27.2
Oeu038408.4 Olea europaea HOM05D005071 ORTHO05D006069 2.5e-19 100.9 366 26.5
Rhsim08G0124200 Rhododendron simsii HOM05D005071 ORTHO05D006069 2.5e-19 100.9 355 28.5
MELO3C001942.2 Cucumis melo HOM05D005071 ORTHO05D006069 3.3e-19 100.5 346 27.2
THA.LOC104820332 Tarenaya hassleriana HOM05D005071 ORTHO05D006069 5.7e-19 99.8 339 28.3
Potri.012G038900 Populus trichocarpa HOM05D005071 ORTHO05D006069 1.7e-18 98.2 338 28.4
CARHR038040 Cardamine hirsuta HOM05D005071 ORTHO05D006069 2.8e-18 97.4 338 26.3
Eucgr.H00596 Eucalyptus grandis HOM05D005071 ORTHO05D006069 4.8e-18 96.7 337 27.6
SGA_v2.0_scaffold25G10767 Striga asiatica HOM05D005071 ORTHO05D006069 6.3e-18 96.3 337 28.2
ECA233G3820 Erigeron canadensis HOM05D006855 ORTHO05D008695 8.2e-18 95.9 110 48.2
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 2.4e-17 94.4 338 27.2
AL1G55050 Arabidopsis lyrata HOM05D005071 ORTHO05D006069 3.1e-17 94.0 338 26.3
Hma1.2p1_0493F.1_g165090 Hydrangea macrophylla HOM05D005071 ORTHO05D006069 3.1e-17 94.0 352 27.3
ECA232G0859 Erigeron canadensis HOM05D005071 ORTHO05D006069 4.1e-17 93.6 335 26.6
AT1G48420 Arabidopsis thaliana HOM05D005071 ORTHO05D006069 5.3e-17 93.2 338 26.6
Gohir.A11G001600 Gossypium hirsutum HOM05D005071 ORTHO05D006069 5.3e-17 93.2 338 28.4
Sed0005435 Sechium edule HOM05D005071 ORTHO05D006069 5.3e-17 93.2 347 26.2
Medtr8g107670 Medicago truncatula HOM05D005071 ORTHO05D006069 9.1e-17 92.4 337 25.8
Zm00001eb256470 Zea mays HOM05D005071 ORTHO05D006069 9.1e-17 92.4 344 28.5
Sc24g0002670 Simmondsia chinensis HOM05D005071 ORTHO05D006069 1.2e-16 92.0 337 27.6
Thhalv10011539m.g Eutrema salsugineum HOM05D005071 ORTHO05D006069 2.6e-16 90.9 338 25.7
Lj5C165T19 Lonicera japonica HOM05D005071 ORTHO05D006069 2.6e-16 90.9 344 27.3
Carub.0001s3754 Capsella rubella HOM05D005071 ORTHO05D006069 3.4e-16 90.5 338 25.1
Migut.O00239 Erythranthe guttata HOM05D005071 ORTHO05D006069 3.4e-16 90.5 338 26.6
MD14G1242800 Malus domestica HOM05D005071 ORTHO05D006069 3.4e-16 90.5 337 26.1
MCO03G464 Micromonas commoda HOM05D005071 ORTHO05D006069 3.4e-16 90.5 333 29.7
Pp3c15_20550 Physcomitrium patens HOM05D005071 ORTHO05D006069 4.5e-16 90.1 346 26.9
VMungo0251G2121 Vigna mungo HOM05D005071 ORTHO05D006069 7.7e-16 89.4 337 27.3
LjContig00484g0022264 Lotus japonicus HOM05D005071 ORTHO05D006069 1.3e-15 88.6 337 27.0
Phvul.002G332800 Phaseolus vulgaris HOM05D005071 ORTHO05D006069 1.3e-15 88.6 337 27.6
HPP92_009318 Vanilla planifolia HOM05D005071 ORTHO05D006069 1.3e-15 88.6 347 28.2
TPR.G1402 Trifolium pratense HOM05D005071 ORTHO05D006069 1.7e-15 88.2 337 26.7
Thecc.03G069100 Theobroma cacao HOM05D005071 ORTHO05D006069 2.9e-15 87.4 338 25.7
CiPaw.16G100100 Carya illinoinensis HOM05D005071 ORTHO05D006069 5.0e-15 86.7 326 28.5
Glyma.05G248600 Glycine max HOM05D005071 ORTHO05D006069 6.5e-15 86.3 326 27.3
Sc24g0002660 Simmondsia chinensis HOM05D005071 ORTHO05D006069 1.1e-14 85.5 337 25.8
SMO364G0181 Selaginella moellendorffii HOM05D005071 ORTHO05D006069 7.2e-14 82.8 341 27.0
MD06G1235700 Malus domestica HOM05D005071 ORTHO05D006069 4.7e-13 80.1 338 26.3
Cre07.g319320 Chlamydomonas reinhardtii HOM05D005071 ORTHO05D006069 5.1e-12 76.6 364 25.5
Cre07.g319400 Chlamydomonas reinhardtii HOM05D005071 ORTHO05D006069 5.1e-12 76.6 364 25.5
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 2.6e-11 74.3 148 35.1
PRCOL_00006696 Prasinoderma coloniale HOM05D005071 ORTHO05D006069 3.1e-09 67.4 349 24.6
Pp3s30_410 Physcomitrium patens HOM05D005071 ORTHO05D006069 7.0e-09 66.2 340 21.2
Cpa.g.sc7.143 Carica papaya HOM05D005071 ORTHO05D006069 1.9e-06 58.2 137 29.9
MBI09_g33807_MAGBIO Magnolia biondii HOM05D000279 ORTHO05D012276 5.5e-06 56.6 34 70.6
QL10p032932 Quercus lobata HOM05D005071 ORTHO05D006069 5.5e-06 56.6 146 28.1


User provided reference genes

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