Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 2.7e-67 258.5 124 100.0
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 8.4e-61 236.9 124 90.3
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.2e-59 233.0 124 88.7
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 3.3e-57 224.9 124 84.7
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 2.8e-56 221.9 125 84.8
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 4.8e-56 221.1 124 85.5
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 8.2e-56 220.3 124 83.1
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 4.1e-55 218.0 124 83.1
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 5.3e-55 217.6 124 80.6
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 9.0e-55 216.9 125 82.4
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 9.0e-55 216.9 125 81.6
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 9.0e-55 216.9 125 82.4
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.2e-54 216.5 125 82.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 1.2e-54 216.5 124 79.8
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.5e-54 216.1 125 82.4
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.6e-54 215.3 125 81.6
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.6e-54 215.3 125 81.6
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 2.6e-54 215.3 125 81.6
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 2.6e-54 215.3 125 81.6
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 4.5e-54 214.5 124 79.8
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 5.8e-54 214.2 125 80.0
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 5.8e-54 214.2 125 80.0
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 5.8e-54 214.2 125 80.8
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 7.6e-54 213.8 124 79.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.3e-53 213.0 125 83.2
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.3e-53 213.0 125 80.0
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.3e-53 213.0 124 80.6
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 1.3e-53 213.0 124 80.6
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.7e-53 212.6 125 80.0
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 82.4
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 80.0
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 2.9e-53 211.8 125 80.0
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 2.9e-53 211.8 125 80.0
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.8e-53 211.5 124 79.8
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.8e-53 211.5 124 79.8
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 3.8e-53 211.5 125 82.4
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 6.5e-53 210.7 125 80.0
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 8.4e-53 210.3 125 79.2
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 1.1e-52 209.9 125 79.2
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.4e-52 209.5 125 80.0
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 1.4e-52 209.5 124 79.0
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.4e-52 209.5 124 79.0
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.4e-52 209.5 124 79.0
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.4e-52 209.5 124 79.8
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 1.9e-52 209.1 124 79.0
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 1.9e-52 209.1 125 77.6
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 79.2
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 78.4
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 78.4
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 5.5e-52 207.6 125 81.6
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 81.6
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 7.2e-52 207.2 124 80.6
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 81.6
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 9.3e-52 206.8 125 80.8
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 9.3e-52 206.8 149 68.5
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.6e-51 206.1 124 77.4
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.6e-51 206.1 124 77.4
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.1e-51 205.7 124 77.4
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 80.8
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 4.6e-51 204.5 132 76.5
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.1e-51 204.1 137 75.9
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 78.4
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 76.8
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 76.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 78.4
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 7.9e-51 203.8 125 76.0
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.8e-50 202.6 124 74.2
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 1.8e-50 202.6 125 77.6
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 2.3e-50 202.2 124 75.8
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 3.0e-50 201.8 125 79.2
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 79.2
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.5e-49 198.7 124 75.0
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 2.8e-48 195.3 124 73.4
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 2.8e-48 195.3 124 76.6
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 6.3e-48 194.1 171 58.5
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 73.6
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 1.8e-47 192.6 125 74.4
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 3.1e-47 191.8 125 76.0
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 75.2
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 72.0
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.2e-46 189.9 124 71.8
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 2.6e-46 188.7 125 72.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.7e-45 186.0 125 71.2
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 2.9e-45 185.3 108 78.7
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 6.5e-45 184.1 124 67.7
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 3.2e-44 181.8 103 83.5
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 9.4e-44 180.3 204 50.0
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 1.2e-43 179.9 125 65.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.1e-43 179.1 103 82.5
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.7e-43 178.7 103 82.5
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 6.1e-43 177.6 125 71.2
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 3.0e-42 175.3 125 66.4
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.3e-41 171.4 103 78.6
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 5.7e-41 171.0 124 64.5
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 5.7e-41 171.0 125 65.6
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 5.7e-41 171.0 125 64.8
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 4.8e-40 167.9 125 68.8
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 2.4e-39 165.6 125 65.6
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 6.9e-39 164.1 123 65.0
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.5e-38 162.9 122 60.7
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 2.0e-38 162.5 125 61.6
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 1.3e-37 159.8 120 64.2
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 5.0e-37 157.9 124 59.7
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 5.0e-37 157.9 124 59.7
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 5.0e-37 157.9 124 62.1
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 3.2e-36 155.2 124 59.7
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.2e-35 153.3 122 59.0
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.2e-35 153.3 122 59.0
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 3.9e-34 148.3 126 57.1
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 2.2e-32 142.5 121 57.9
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 6.3e-32 141.0 113 58.4
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 3.6e-27 125.2 80 71.2
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 3.6e-27 125.2 80 71.2
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 2.0e-22 109.4 105 56.2
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.9e-20 102.8 69 71.0
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 2.5e-20 102.4 80 57.5
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 1.2e-19 100.1 80 57.5
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 6.8e-18 94.4 77 57.1
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 6.8e-18 94.4 77 57.1
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 6.8e-18 94.4 66 63.6
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.8e-16 89.0 58 70.7
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.8e-16 89.0 58 70.7
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.0e-13 80.5 53 71.7
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 2.2e-13 79.3 64 59.4
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 2.9e-13 79.0 58 65.5
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 4.2e-12 75.1 45 75.6
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 1.6e-11 73.2 44 81.8
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 2.7e-11 72.4 44 75.0
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.1e-07 58.9 40 67.5


User provided reference genes

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