Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 4.2e-164 581.3 283 100.0
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 4.0e-50 202.6 213 59.6
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 4.2e-39 166.0 191 51.8
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 4.2e-39 166.0 211 47.9
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 5.4e-39 165.6 180 51.1
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 9.3e-39 164.9 192 48.4
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.2e-38 164.5 212 48.6
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.1e-38 163.7 167 52.7
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.3e-37 160.2 179 50.8
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 2.3e-37 160.2 164 50.6
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 2.3e-37 160.2 186 46.8
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 8.7e-37 158.3 179 47.5
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.5e-36 157.5 166 50.0
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 2.5e-36 156.8 168 49.4
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 5.6e-36 155.6 140 61.4
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 7.4e-36 155.2 168 50.0
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.3e-35 154.5 212 42.0
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 8.1e-35 151.8 160 51.2
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 8.1e-35 151.8 167 51.5
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 4.0e-34 149.4 167 50.9
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 6.9e-34 148.7 151 54.3
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 6.9e-34 148.7 160 50.6
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 9.0e-34 148.3 167 48.5
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 2.0e-33 147.1 90 75.6
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.6e-33 146.7 166 47.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 3.4e-33 146.4 171 46.2
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 2.2e-32 143.7 204 45.6
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.2e-32 143.7 167 49.1
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 1.4e-31 141.0 158 47.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.4e-31 141.0 167 44.9
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.9e-31 140.6 93 67.7
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.9e-31 140.6 204 45.1
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 3.2e-31 139.8 92 70.7
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 3.2e-31 139.8 94 70.2
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 5.5e-31 139.0 157 49.0
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 7.1e-31 138.7 90 70.0
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 9.3e-31 138.3 105 62.9
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 9.3e-31 138.3 105 61.9
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.2e-30 137.9 163 46.0
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 1.2e-30 137.9 177 45.2
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.6e-30 137.5 192 45.8
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.1e-30 137.1 167 46.1
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 4.6e-30 136.0 156 48.1
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 4.6e-30 136.0 111 57.7
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.9e-30 135.2 206 44.2
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 7.9e-30 135.2 91 65.9
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.9e-30 135.2 148 49.3
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 7.9e-30 135.2 225 38.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 1.0e-29 134.8 211 42.7
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.0e-29 134.8 90 71.1
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.8e-29 134.0 168 44.6
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.3e-29 133.7 157 48.4
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 1.9e-28 130.6 89 67.4
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 3.3e-28 129.8 196 40.3
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 7.4e-28 128.6 164 45.7
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.3e-27 127.9 146 46.6
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.8e-27 126.7 175 42.9
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.1e-26 124.8 182 41.2
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 1.1e-26 124.8 159 47.2
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.4e-26 124.4 90 63.3
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.4e-26 124.4 167 43.7
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 1.8e-26 124.0 148 47.3
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 3.1e-26 123.2 166 43.4
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 9.0e-26 121.7 93 62.4
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.2e-25 121.3 90 62.2
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.2e-25 121.3 90 62.2
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.2e-25 121.3 160 43.8
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.2e-25 121.3 160 43.8
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.2e-25 121.3 164 42.1
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.5e-25 120.9 161 42.2
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.5e-25 120.9 161 42.2
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 1.0e-24 118.2 173 41.6
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.3e-24 117.9 93 60.2
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 3.8e-24 116.3 114 54.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.9e-24 115.9 159 43.4
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.4e-23 114.4 168 42.9
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.9e-23 114.0 94 58.5
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 5.5e-23 112.5 164 41.5
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 9.3e-23 111.7 87 56.3
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.2e-22 111.3 101 57.4
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 4.6e-22 109.4 151 45.7
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.3e-21 107.8 87 55.2
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 8.7e-21 105.1 234 34.6
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 2.2e-19 100.5 152 43.4
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 4.8e-19 99.4 180 35.6
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 5.3e-18 95.9 166 35.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 2.0e-17 94.0 165 37.6
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.3e-16 91.3 191 35.6
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 6.5e-16 89.0 251 33.9
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.9e-15 87.4 152 32.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 5.5e-15 85.9 165 34.5
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 2.7e-14 83.6 90 50.0
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 4.3e-12 76.3 214 29.9
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 2.8e-11 73.6 90 43.3
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.6e-09 67.0 87 39.1
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.4e-07 61.2 96 39.6
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 1.9e-07 60.8 41 68.3
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.1e-06 57.4 208 27.9


User provided reference genes

Program Settings